Pre_GI: BLASTP Hits

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Query: NC_011963:1979136:1994504 Rhodobacter sphaeroides KD131 chromosome 1, complete sequence

Start: 1994504, End: 1994794, Length: 291

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Halophilic, purple nonsulfur photosynthetic bacterium. Capable of producing high levels of biohydrogen (H2). Originally isolated from sea mud off the coast of DaeBu Island, South Korea. Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014034:1394898:139489813948981395188291Rhodobacter capsulatus SB1003 chromosome, complete genomeCas2 family CRISPR-associated protein3e-43173
NC_007512:1459685:147272514727251473015291Pelodictyon luteolum DSM 273, complete genomeProtein of unknown function DUF1962e-33140
NC_008741:15699:328013280133091291Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein Cas26e-33139
NC_011060:1746000:176158617615861761876291Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas21e-32137
NC_015677:3685452:369891236989123699202291Ramlibacter tataouinensis TTB310 chromosome, complete genomeCRISPR-associated protein Cas24e-32136
NC_005085:1269787:129286012928601293150291Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-31134
NC_007759:2748000:275316527531652753455291Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein7e-31132
NC_009337:1448607:146090314609031461190288Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated Cas2 family protein8e-30129
NC_014960:1380500:138425113842511384541291Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-29127
NC_015976:1893076:191526119152611915551291Sphingobium sp. SYK-6, complete genomehypothetical protein3e-28123
NC_009523:5438000:544184854418485442138291Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Cas2 family protein8e-27119
NC_014484:447889:460643460643460930288Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein Cas23e-26117
NC_016584:1912000:192610619261061926396291Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated endoribonuclease Cas26e-26115
NC_010995:2798000:280245528024552802748294Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein Cas21e-24111
NC_013740:842841:881739881739882029291Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein Cas22e-24110
NC_013204:2305140:231254423125442312843300Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein Cas22e-24110
NC_014364:1116439:112782411278241128117294Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein Cas27e-23105
NC_021175:353292:364313364313364606294Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein cas23e-22103
NC_014933:3637172:365808636580863658376291Bacteroides helcogenes P 36-108 chromosome, complete genomeCRISPR-associated protein, Cas2 family6e-22102
NC_012470:1606000:160625516062551606545291Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein Cas21e-21101
NC_007947:621213:632123632123632416294Methylobacillus flagellatus KT, complete genomeprotein of unknown function DUF1961e-21101
NC_010610:1385066:139389213938921394182291Lactobacillus fermentum IFO 3956, complete genomehypothetical protein5e-2199.8
NC_016630:28410:409624096241255294Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein Cas25e-2199.8
NC_020126:9726992:973324097332409733539300Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas2 family protein2e-2097.4
NC_017218:1655009:166134716613471661637291Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeputative CRISPR-associated endoribonuclease Cas22e-2097.4
NC_019968:8397:207812078121071291Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated endoribonuclease Cas22e-1994
NC_016012:665171:670097670097670387291Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated protein cas25e-1992.8
NC_014221:1786122:180478518047851805075291Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein Cas21e-1891.7
NC_015387:261799:273564273564273863300Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas21e-1788.2
NC_004757:905417:920552920552920842291Nitrosomonas europaea ATCC 19718, complete genomeDUF1969e-1785.5
NC_008618:1456000:146222814622281462518291Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein Cas22e-1684.3
NC_019673:2051363:209114020911402091430291Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1375.1
NC_007777:3962000:397080139708013971091291Frankia sp. CcI3, complete genomeprotein of unknown function DUF1962e-1271.2
NC_007775:2546833:255970725597072559985279Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas23e-1063.9
NC_008254:3246306:325086132508613251124264Mesorhizobium sp. BNC1, complete genomeprotein of unknown function DUF1961e-0962
NC_011060:2525367:254138725413872541671285Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas29e-0958.9
NC_008639:2358592:239252523925252392794270Chlorobium phaeobacteroides DSM 266, complete genomeCRISPR-associated protein Cas22e-0858.2
NC_010803:1009000:101234210123421012626285Chlorobium limicola DSM 245, complete genomeCRISPR-associated protein Cas23e-0857.4
NC_008639:2358592:238163923816392381923285Chlorobium phaeobacteroides DSM 266, complete genomeCRISPR-associated protein Cas25e-0856.6
NC_014836:1108919:113047911304791130754276Desulfurispirillum indicum S5 chromosome, complete genomeCRISPR-associated protein Cas25e-0753.1
NC_021184:823000:832523832523832786264Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated endoribonuclease Cas27e-0649.3