Pre_GI Gene

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Host: NC_010803 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010803:1009000 Chlorobium limicola DSM 245, complete genome

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10090611009684624CRISPR-associated protein Cas1QuickGO ontologyBLASTP
10123421012626285CRISPR-associated protein Cas2QuickGO ontologyBLASTP
101274610149412196CRISPR-associated protein Cas1QuickGO ontologyBLASTP
10176921018687996CRISPR-associated RAMP protein Cmr1 familyQuickGO ontologyBLASTP
101868410199551272protein of unknown function DUF324QuickGO ontologyBLASTP
101995210227682817CRISPR-associated protein Csx11 familyQuickGO ontologyBLASTP
10227611023753993CRISPR-associated RAMP protein Cmr4 familyQuickGO ontologyBLASTP
10237501024124375hypothetical proteinBLASTP
10241241024927804hypothetical proteinBLASTP
102498610264071422hypothetical protein
10279571028250294transposase IS3IS911 family proteinQuickGO ontologyBLASTP
10282471029167921Integrase catalytic regionQuickGO ontologyBLASTP