Pre_GI: BLASTP Hits

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Query: NC_017168:2158839:2182266 Yersinia pestis A1122 chromosome, complete genome

Start: 2182266, End: 2182553, Length: 288

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004088:1075454:109888110988811099168288Yersinia pestis KIM, complete genomehypothetical protein2e-49194
NC_008149:1002453:102588010258801026167288Yersinia pestis Nepal516, complete genomehypothetical protein2e-49194
NC_017328:335160:355284355284355568285Shigella flexneri 2002017 chromosome, complete genomeprotein yaiE2e-31134
NC_004337:309833:337420337420337704285Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-31134
NC_004741:310382:336554336554336838285Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-31134
NC_009656:3869281:388882738888273889108282Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-22105
NC_015740:1845370:185435218543521854633282Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-2199.8
NC_008260:2961291:297258129725812972865285Alcanivorax borkumensis SK2, complete genomehypothetical protein7e-2199.4
NC_004460:1313468:131799913179991318280282Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein3e-1890.5
NC_007498:1562270:156510415651041565418315Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein6e-1682.8
NC_018531:2085939:210157321015732101884312Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein5e-1373.2
NC_009663:2478311:249166024916602491971312Sulfurovum sp. NBC37-1, complete genomehypothetical protein1e-1272
NC_011146:3537546:355831135583113558622312Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF12555e-1269.7
NC_010814:2074266:207426620742662074580315Geobacter lovleyi SZ, complete genomeprotein of unknown function DUF12553e-1167.4
NC_007953:1434705:145007614500761450396321Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-1167.4
NC_009850:1011293:101258710125871012901315Arcobacter butzleri RM4018, complete genomeconserved hypothetical protein (DUF1255 domain protein)4e-1166.6
NC_013173:815696:839002839002839316315Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF12554e-1166.6
NC_015422:3513689:355832135583213558638318Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-1064.3
NC_010676:3009980:304045830404583040778321Burkholderia phytofirmans PsJN chromosome 2, complete sequenceprotein of unknown function DUF12555e-1063.2
NC_008391:865340:868053868053868373321Burkholderia cepacia AMMD chromosome 2, complete sequenceprotein of unknown function DUF12552e-0961.2
NC_006361:1720031:172327517232751723586312Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-0960.8
NC_008702:2378890:239169723916972392020324Azoarcus sp. BH72, complete genomeconserved hypothetical protein4e-0856.6
NC_007298:3271071:327300832730083273319312Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF12551e-0755.1
NC_017187:691769:711614711614711928315Arcobacter butzleri ED-1, complete genomehypothetical protein7e-0752.8