Pre_GI: BLASTP Hits

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Query: NC_016582:9664000:9681086 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9681086, End: 9682342, Length: 1257

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016932:1791868:1791868179186817931511284Corynebacterium pseudotuberculosis 316 chromosome, complete genomephosphoserine phosphatase4e-96352
NC_014033:2410331:2411618241161824128501233Prevotella ruminicola 23 chromosome, complete genomephosphoserine phosphatase SerB5e-62238
NC_008553:1809780:1830003183000318312051203Methanosaeta thermophila PT, complete genomephosphoserine phosphatase SerB4e-54212
NC_021175:597968:597968597968598615648Streptococcus oligofermentans AS 1.3089, complete genomephosphoserine phosphatase4e-52206
NC_010508:1980689:200465920046592005504846Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencephosphoserine phosphatase SerB7e-48191
NC_004307:2208591:223382022338202234572753Bifidobacterium longum NCC2705, complete genomeprobable phosphoserine phosphatase1e-47190
NC_017221:535000:561314561314562036723Bifidobacterium longum subsp. longum KACC 91563 chromosome,phosphoserine phosphatase1e-47190
NC_010816:2326453:235296623529662353688723Bifidobacterium longum DJO10A, complete genomePhosphoserine phosphatase2e-47190
NC_014618:4010689:403193740319374032908972Enterobacter cloacae SCF1 chromosome, complete genomephosphoserine phosphatase SerB1e-45184
NC_004757:427483:477187477187478017831Nitrosomonas europaea ATCC 19718, complete genomepossible serB; phosphoserine phosphatase protein1e-42174
NC_016513:54802:789527895279896945Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphoserine phosphatase4e-42172
NC_009778:3287693:330560533056053306489885Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-42171
NC_020260:3277007:329651432965143297485972Cronobacter sakazakii Sp291, complete genomephosphoserine phosphatase1e-41171
NC_011365:1969198:196919819691981970094897Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomephosphoserine phosphatase SerB4e-37155
NC_010125:1:199321993220828897Gluconacetobacter diazotrophicus PAl 5, complete genomePhosphoserine phosphatase4e-37155
NC_015216:2113556:2118251211825121200531803Methanobacterium sp. AL-21 chromosome, complete genomephosphoserine phosphatase SerB2e-36153
NC_015563:4414854:441911144191114419824714Delftia sp. Cs1-4 chromosome, complete genomephosphoserine phosphatase SerB3e-35149
NC_014935:1223817:126169312616931262343651Nitratifractor saLSUginis DSM 16511 chromosome, complete genomephosphoserine phosphatase8e-33141
NC_016043:471719:487978487978488742765Taylorella asinigenitalis MCE3 chromosome, complete genomephosphoserine phosphatase3e-31136
NC_013158:200424:219581219581220213633Halorhabdus utahensis DSM 12940, complete genomephosphoserine phosphatase SerB7e-28125
NC_015571:1065775:107453310745331075405873Porphyromonas gingivalis TDC60, complete genomeSerB family protein1e-27124
NC_014150:3053859:305763330576333058253621Brachyspira murdochii DSM 12563 chromosome, complete genomephosphoserine phosphatase SerB2e-27124
NC_015954:463500:464736464736465371636Halophilic archaeon DL31 chromosome, complete genomeHAD-superfamily hydrolase3e-24113
NC_013922:1911338:191462419146241915262639Natrialba magadii ATCC 43099 chromosome, complete genomephosphoserine phosphatase SerB8e-24111
NC_013202:771161:791199791199791831633Halomicrobium mukohataei DSM 12286, complete genomeHAD-superfamily hydrolase, subfamily IB (PSPase- like)9e-24111
NC_016609:6361862:6363875636387563652511377Niastella koreensis GR20-10 chromosome, complete genomefamily 2 glycosyl transferase6e-1479
NC_014804:341663:357069357069357659591Thermococcus barophilus MP chromosome, complete genomephosphoserine phosphatase9e-1168.6
NC_002944:4446083:445411044541104455021912Mycobacterium avium subsp. paratuberculosis K-10, complete genomeSerB4e-1066.2
NC_016906:3286384:3305667330566733071541488Gordonia polyisoprenivorans VH2 chromosome, complete genome1-acyl-sn-glycerol-3-phosphate acyltransferase2e-0757.4
NC_008789:942309:964198964198964881684Halorhodospira halophila SL1, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-0757.4
NC_014924:725380:737530737530738132603Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IB (PSPase-like)2e-0757.4
NC_007777:2459357:246182724618272462507681Frankia sp. CcI3, complete genomeHAD-superfamily subfamily IB, PSPase-like3e-0757
NC_009512:5632591:568192156819215682577657Pseudomonas putida F1, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014903e-0756.6
NC_005125:3420270:342027034202703421040771Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0756.2
NC_009438:3019552:303701730370173037616600Shewanella putrefaciens CN-32 chromosome, complete genomeHAD family hydrolase5e-0755.8
NC_010170:1417615:143470414347041435333630Bordetella petrii, complete genomehypothetical protein2e-0653.9
NC_009439:3104000:311944131194413120046606Pseudomonas mendocina ymp, complete genomeHAD family hydrolase6e-0652.4
NC_011979:589874:593387593387594106720Geobacter sp. FRC-32, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014907e-0652