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Query: NC_016582:5393568:5406421 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 5406421, End: 5407734, Length: 1314

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:1070500:1074060107406010753701311Streptomyces violaceusniger Tu 4113 chromosome, complete genomecell division FtsK/SpoIIIE5e-156551
NC_013929:5927935:5938148593814859394581311Streptomyces scabiei 87.22 chromosome, complete genomeFtsK/SpoIIIE family protein1e-128460
NC_003888:4314389:4328871432887143301721302Streptomyces coelicolor A3(2), complete genomeftsK/spoIIIE family protein1e-124446
NC_014210:723719:7347047347047360441341Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cell division protein FtsK/SpoIIIE9e-64244
NC_014165:92500:99459994591008411383Thermobispora bispora DSM 43833 chromosome, complete genomecell division FtsK/SpoIIIE2e-62240
NC_013595:9547254:9559611955961195609631353Streptosporangium roseum DSM 43021, complete genomeDNA segregation ATPase FtsK/SpoIIIE and related protein-like protein8e-62238
NC_013510:5115500:5135764513576451371071344Thermomonospora curvata DSM 43183, complete genomecell divisionFtsK/SpoIIIE4e-61236
NC_013929:3299736:3341591334159133429821392Streptomyces scabiei 87.22 chromosome, complete genomeplasmid transfer protein5e-47189
NC_021177:3997727:4012040401204040133921353Streptomyces fulvissimus DSM 40593, complete genomePlasmid transfer protein1e-45184
NC_003888:3602753:3607061360706136084161356Streptomyces coelicolor A3(2), complete genomeplasmid transfer protein2e-44180
NC_003888:5790104:5811167581116758125221356Streptomyces coelicolor A3(2), complete genomeplasmid transfer protein3e-44179
NC_010572:3925803:3933977393397739353261350Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative plasmid transfer protein1e-43177
NC_003155:4592000:4619007461900746203861380Streptomyces avermitilis MA-4680, complete genomeplasmid transfer protein7e-43175
NC_003155:4906639:4911150491115049124451296Streptomyces avermitilis MA-4680, complete genomeplasmid transfer protein3e-42173
NC_013929:5248000:5262523526252352638991377Streptomyces scabiei 87.22 chromosome, complete genomeplasmid transfer protein1e-41171
NC_003888:6103534:6133491613349161357972307Streptomyces coelicolor A3(2), complete genometraSA:integrase fusion protein2e-41170
NC_018750:4333064:4338103433810343394491347Streptomyces venezuelae ATCC 10712, complete genomeputative plasmid transfer protein6e-40165
NC_016114:3575955:3581348358134835827001353Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeDNA translocase FtsK8e-37155
NC_013093:7437033:7452261745226174537361476Actinosynnema mirum DSM 43827, complete genomecell divisionFtsK/SpoIIIE4e-1066.2
NC_019673:1420198:1432754143275414342381485Saccharothrix espanaensis DSM 44229 complete genomeCell division protein, FtsK/SpoIIIE family1e-0965.1
NC_008758:143907:1570061570061624445439Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completecell divisionFtsK/SpoIIIE2e-0653.9