Pre_GI: BLASTN Hits

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Query: NC_015951:46000 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete

Start: 46000, End: 78901, Length: 32902

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015951:71697716979528623590Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete03753BLASTN svgBLASTP svg
NC_018750:65882066588206661440326198Streptomyces venezuelae ATCC 10712, complete genome0739BLASTN svgBLASTP svg
NC_003888:86138488613848863240818561Streptomyces coelicolor A3(2), complete genome0718BLASTN svgBLASTP svg
NC_010572:80226980226982859326325Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-152547BLASTN svgBLASTP svg
NC_003888:21174821174823351821771Streptomyces coelicolor A3(2), complete genome4e-89337BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-87331BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome3e-65258BLASTN svgBLASTP svg
NC_010572:84939468493946855999966054Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-44188BLASTN svgBLASTP svg
NC_010572:113201832018Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-44188BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome5e-27131BLASTN svgBLASTP svg
NC_019673:7951493*7951493797009918607Saccharothrix espanaensis DSM 44229 complete genome3e-25125BLASTN svgBLASTP svg
NC_003155:62299362299365432631334Streptomyces avermitilis MA-4680, complete genome5e-24121BLASTN svgBLASTP svg
NC_013131:44734104473410449211718708Catenulispora acidiphila DSM 44928, complete genome2e-20109BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013131:9903320*9903320995737154052Catenulispora acidiphila DSM 44928, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015588:22813542281354230471323360Isoptericola variabilis 225 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007164:14343051434305147733743033Corynebacterium jeikeium K411, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_004547:1683593*1683593172730343711Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014318:5586287*5586287562248536199Amycolatopsis mediterranei U32 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014318:63953926395392646309967708Amycolatopsis mediterranei U32 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_020126:4517133*4517133455758540453Myxococcus stipitatus DSM 14675, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013854:2714033*2714033273463520603Azospirillum sp. B510, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013124:1606879*1606879163180724929Acidimicrobium ferrooxidans DSM 10331, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005126:31217223121722318069058969Photorhabdus luminescens subsp. laumondii TTO1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_020126:3383902*3383902342138737486Myxococcus stipitatus DSM 14675, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_021177:20347222034722205851023789Streptomyces fulvissimus DSM 40593, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013595:52213305221330524437223043Streptosporangium roseum DSM 43021, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008702:1094663*1094663111848823826Azoarcus sp. BH72, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015711:6522808*6522808656473541928Myxococcus fulvus HW-1 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_021177:4124839*4124839415343928601Streptomyces fulvissimus DSM 40593, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_021177:74620007462000748896926970Streptomyces fulvissimus DSM 40593, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_021177:78157917815791783813922349Streptomyces fulvissimus DSM 40593, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_020126:67917266791726685021658491Myxococcus stipitatus DSM 14675, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019940:2931500*2931500296263931140Thioflavicoccus mobilis 8321 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015953:32580003258000327922821229Streptomyces sp. SirexAA-E chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015738:3042000*3042000306596823969Eggerthella sp. YY7918, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014761:1795304*1795304182036125058Oceanithermus profundus DSM 14977 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014722:1971305*1971305199935928055Burkholderia rhizoxinica HKI 454, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012214:1267589*1267589129886031272Erwinia pyrifoliae Ep1/96, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013440:39770973977097405558678490Haliangium ochraceum DSM 14365, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013595:71957647195764721894723184Streptosporangium roseum DSM 43021, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014483:4532000*4532000458655454555Paenibacillus polymyxa E681 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005126:12650711265071131880053730Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-0661.9BLASTN svgBLASTP svg