Pre_GI: BLASTP Hits

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Query: NC_015761:1970042:1987151 Salmonella bongori NCTC 12419, complete genome

Start: 1987151, End: 1988134, Length: 984

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:2982000:298889929888992989885987Salmonella bongori NCTC 12419, complete genomehypothetical protein7e-69261
NC_012724:2547500:255957125595712560557987Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein4e-44178
NC_011989:2795811:2801580280158028025871008Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein2e-30132
NC_011989:2795811:2799426279942628004661041Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein7e-29128
NC_011989:2795811:280054228005422801516975Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein9e-29127
NC_010067:51000:5493254932561461215Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1271.6
NC_007434:1809946:1822420182242018235381119Burkholderia pseudomallei 1710b chromosome I, complete sequencegp307e-1271.6
NC_009778:259241:2712282712282724241197Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1169.3
NC_013282:3719500:372340237234023724379978Cronobacter turicensis, complete genomehypothetical protein5e-1065.5
NC_009778:259241:2699822699822711781197Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0963.9
NC_003305:1:808580858774690Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-0963.5
NC_003063:2059311:206610520661052066671567Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-0962.8
NC_005126:949226:9554189554189565751158Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0860.8
NC_005126:949226:9504089504089515651158Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0859.7
NC_007434:3973145:3980318398031839815321215Burkholderia pseudomallei 1710b chromosome I, complete sequencegp304e-0858.9
NC_012724:2611000:2620522262052226217361215Burkholderia glumae BGR1 chromosome 1, complete genomegp301e-0757.8
NC_009074:2117500:2129364212936421306801317Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein3e-0756.2
NC_015761:2982000:298790329879032988832930Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-0755.8
NC_020260:263528:274735274735275427693Cronobacter sakazakii Sp291, complete genomehypothetical protein7e-0755.1
NC_008095:7563441:7582180758218075833191140Myxococcus xanthus DK 1622, complete genomehypothetical protein7e-0755.1
NC_020126:8512908:852677685267768527732957Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-0652.8