Pre_GI: BLASTP Hits

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Query: NC_013410:2037840:2058929 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2058929, End: 2059213, Length: 285

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017059:2922000:293755729375572937829273Rhodospirillum photometricum DSM 122, complete genomeFerrous iron transport protein A3e-1580.5
NC_015572:2541968:254582425458242546057234Methylomonas methanica MC09 chromosome, complete genomeFeoA family protein3e-1167
NC_013199:1886271:188704918870491887540492Lactobacillus rhamnosus Lc 705, complete genomeFe2 transport system protein A2e-0858.2
NC_010999:1979989:198208719820871982368282Lactobacillus casei, complete genomeFerrous ion transport protein A2e-0857.8
NC_008698:903759:922685922685923005321Thermofilum pendens Hrk 5, complete genomeFeoA family protein3e-0857.4
NC_014500:2616423:261876726187672618994228Dickeya dadantii 3937 chromosome, complete genomeFerrous iron transport protein A3e-0857.4
NC_013592:2160000:218063221806322180859228Dickeya dadantii Ech586, complete genomeFeoA family protein3e-0857.4
NC_014334:1775781:177787917778791778370492Lactobacillus casei str. Zhang chromosome, complete genomeFe2+ transport system protein A3e-0857
NC_013849:376676:384349384349384576228Ferroglobus placidus DSM 10642 chromosome, complete genomeFeoA family protein8e-0855.8
NC_020207:2240115:225966322596632260136474Enterococcus faecium NRRL B-2354, complete genomeferrous iron transport protein A1e-0755.5
NC_010729:1179008:1207318120731812098522535Porphyromonas gingivalis ATCC 33277, complete genomeferrous iron transport protein B3e-0754.3
NC_013132:893849:903414903414903653240Chitinophaga pinensis DSM 2588, complete genomeFeoA family protein4e-0753.5
NC_011296:909558:933880933880934107228Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein4e-0753.5
NC_014624:2549219:256043325604332560654222Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0651.6
NC_010001:1488000:150863315086331508854222Clostridium phytofermentans ISDg, complete genomeFeoA family protein2e-0651.6
NC_015975:789312:805594805594806073480Lactobacillus ruminis ATCC 27782 chromosome, complete genomeFe2+ transport system protein A2e-0651.2
NC_014002:1772060:179740517974051797650246Methanohalophilus mahii DSM 5219 chromosome, complete genomeFeoA family protein4e-0650.1
NC_014011:1264165:126941012694101269700291Aminobacterium colombiense DSM 12261 chromosome, complete genomeFeoA family protein4e-0650.1
NC_015275:3594890:363350736335073633731225Clostridium lentocellum DSM 5427 chromosome, complete genomeFeoA family protein6e-0649.7
NC_015519:270637:272955272955273188234Tepidanaerobacter sp. Re1 chromosome, complete genomeFeoA family protein6e-0649.7
NC_016609:7819243:782780378278037828036234Niastella koreensis GR20-10 chromosome, complete genomeFeoA family protein7e-0649.3