Pre_GI: BLASTP Hits

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Query: NC_013316:4095905:4107080 Clostridium difficile R20291, complete genome

Start: 4107080, End: 4108201, Length: 1122

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:4023139:4034314403431440354351122Clostridium difficile BI1, complete genomeconjugative transposon replication initiation factor0747
NC_013315:4015119:4026294402629440274151122Clostridium difficile CD196 chromosome, complete genomeconjugative transposon replication initiation factor0747
NC_009089:428075:4493604493604504721113Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor0659
NC_009089:3935500:3960451396045139616411191Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor3e-149528
NC_009089:581655:5880105880105892181209Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor7e-133473
NC_016630:1247251:1261191126119112623661176Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator2e-132472
NC_013895:1332832:1365854136585413670591206Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDNA-binding protein4e-132471
NC_013798:1778758:1782548178254817837531206Streptococcus gallolyticus UCN34, complete genomeputative transcriptional regulator, Cro/CI family (Tn916)4e-132471
NC_017341:428500:4448524448524460361185Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,replication initiation factor2e-124445
NC_017347:424500:4411904411904423741185Staphylococcus aureus subsp. aureus T0131 chromosome, completeTranscriptional regulator, Tn9162e-124445
NC_002758:434462:4516344516344528181185Staphylococcus aureus subsp. aureus Mu50, complete genomeputative transcriptional regulator2e-124445
NC_004668:2198027:2259869225986922610531185Enterococcus faecalis V583, complete genometranscriptional regulator, Cro/CI family1e-118426
NC_009089:3889811:390677139067713907751981Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor8e-116417
NC_000964:521975:5343345343345353921059Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein9e-63241
NC_014639:1:2646264637041059Bacillus atrophaeus 1942 chromosome, complete genomereplication protein; mobile element region2e-62239
CP002207:1:2646264637041059Bacillus atrophaeus 1942, complete genomeputative replication protein; mobile element region2e-62239
NC_009848:582775:5945595945595956591101Bacillus pumilus SAFR-032, complete genometranscriptional regulator1e-49197
NC_017219:333279:347153347153347704552Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator6e-43175
NC_011593:333488:347362347362347913552Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,helix-turn-helix domain-containing protein6e-43175
NC_013450:45782:6541465414665021089Staphylococcus aureus subsp. aureus ED98, complete genomereplication initiation factor family protein3e-38159
NC_002952:1349006:1362073136207313630981026Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein3e-32139
NC_007793:1633080:1641686164168616427771092Staphylococcus aureus subsp. aureus USA300, complete genomereplication initiation factor family protein6e-32138
NC_017347:2724313:2737501273750127386521152Staphylococcus aureus subsp. aureus T0131 chromosome, completeRstA6e-32138
NC_017191:467207:481447481447481893447Bacillus amyloliquefaciens XH7 chromosome, complete genomereplication protein; mobile element region1e-1377.8
NC_014355:288000:2976582976582986651008Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-0756.6
NC_017218:178564:1889141889141900741161Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomereplication initiation factor5e-0755.8
NC_017188:461177:475527475527475871345Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative replication protein; mobile element region2e-0653.9