Pre_GI: BLASTP Hits

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Query: NC_012917:2971702:2985810 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2985810, End: 2986013, Length: 204

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1873390:193030119303011930504204Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-29125
NC_013421:2004088:201060220106022010805204Pectobacterium wasabiae WPP163, complete genomeDextransucrase DSRB3e-28123
NC_010159:2955562:297188329718832972074192Yersinia pestis Angola, complete genomeDsrB protein9e-22102
NC_003143:1880000:188420018842001884391192Yersinia pestis CO92, complete genomehypothetical protein9e-22102
NC_005810:1976000:198046419804641980655192Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein9e-22102
NC_009381:2009842:202556620255662025757192Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-22102
NC_017265:1715035:172062017206201720811192Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein9e-22102
NC_012880:1765920:178848117884811788672192Dickeya dadantii Ech703, complete genomehypothetical protein9e-22102
NC_013592:1668092:169225816922581692458201Dickeya dadantii Ech586, complete genomeDextransucrase DSRB5e-2199.4
NC_012947:1769438:181251418125141812702189Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-1891.7
NC_012779:1820244:182302218230221823225204Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-1891.3
NC_021066:601029:623942623942624130189Raoultella ornithinolytica B6, complete genomehypothetical protein2e-1890.9