Pre_GI: BLASTP Hits

Some Help

Query: NC_012850:459315:459315 Rhizobium leguminosarum bv. trifolii WSM1325, complete genome

Start: 459315, End: 460085, Length: 771

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011420:3894660:391380739138073914595789Rhodospirillum centenum SW, complete genomeacylneuraminate cytidylyltransferase, putative2e-88325
NC_008593:980731:990337990337991047711Clostridium novyi NT, complete genomeAcylneuraminate cytidylyltransferase3e-29129
NC_012108:4118888:413799141379914138686696Desulfobacterium autotrophicum HRM2, complete genomeNeuA7e-26117
NC_012491:5628000:563935656393565640060705Brevibacillus brevis NBRC 100599, complete genomeCMP-N-acetylneuraminic acid synthetase4e-25115
NC_006510:3133965:314257431425743143275702Geobacillus kaustophilus HTA426, complete genomeacylneuraminate cytidylyltransferase1e-24113
NC_015660:391627:408426408426409115690Geobacillus thermoglucosidasius C56-YS93 chromosome, completeN-acylneuraminate cytidylyltransferase2e-24113
NC_015160:136055:138876138876139565690Odoribacter splanchnicus DSM 20712 chromosome, complete genomepseudaminic acid CMP-transferase3e-24112
NC_017068:2436960:248822824882282488908681Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative acylneuraminate cytidylyltransferase3e-24112
NC_014166:2959688:297564229756422976355714Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepseudaminic acid CMP-transferase4e-23108
NC_013642:400651:425601425601426305705Thermotoga naphthophila RKU-10, complete genomeacylneuraminate cytidylyltransferase4e-23108
NC_017187:641822:651183651183651896714Arcobacter butzleri ED-1, complete genomeacylneuraminate cytidylyltransferase5e-23108
NC_009783:649500:661285661285661977693Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein9e-23107
NC_015738:978794:993962993962994663702Eggerthella sp. YY7918, complete genomeCMP-N-acetylneuraminic acid synthetase8e-23107
NC_016620:341699:378225378225378926702Bacteriovorax marinus SJ, complete genomeacylneuraminate cytidylyltransferase8e-23107
NC_010516:2877407:289169028916902892400711Clostridium botulinum B1 str. Okra, complete genomeacylneuraminate cytidylyltransferase4e-22105
NC_012779:1286500:1308142130814213093921251Edwardsiella ictaluri 93-146, complete genomeN-acylneuraminate cytidylyltransferase4e-22105
NC_007644:779376:794773794773795474702Moorella thermoacetica ATCC 39073, complete genomeAcylneuraminate cytidylyltransferase3e-22105
NC_008322:1595500:160558016055801606269690Shewanella sp. MR-7, complete genomeacylneuraminate cytidylyltransferase3e-22105
NC_013508:1289159:1311656131165613129061251Edwardsiella tarda EIB202, complete genomeacylneuraminate cytidylyltransferase2e-22105
NC_013204:2826500:284319428431942843901708Eggerthella lenta DSM 2243, complete genomeacylneuraminate cytidylyltransferase6e-22104
NC_020063:1659795:166877116687711669481711Enterobacteriaceae bacterium strain FGI 57, complete genomepseudaminic acid CMP-transferase7e-22104
NC_012969:142000:154604154604155326723Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeacylneuraminate cytidylyltransferase9e-22103
NC_008319:171847:179716179716180408693Synechococcus sp. CC9311, complete genomeCMP-N-acetylneuraminic acid synthetase2e-21103
NC_015572:1252000:126336012633601264070711Methylomonas methanica MC09 chromosome, complete genomeN-acylneuraminate cytidylyltransferase3e-21102
NC_009434:4140362:415163341516334152331699Pseudomonas stutzeri A1501, complete genomeacylneuraminate cytidylyltransferase3e-21102
NC_013922:138246:162574162574163272699Natrialba magadii ATCC 43099 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-21102
NC_008576:677128:678329678329679018690Magnetococcus sp. MC-1, complete genomeacylneuraminate cytidylyltransferase5e-21101
NC_016815:1543308:155150115515011552205705Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceRkpN: putative acylneuraminate cytidylyltransferase6e-21101
NC_016616:49388:783427834279040699Dechlorosoma suillum PS chromosome, complete genomepseudaminic acid CMP-transferase1e-20100
NC_016002:3704006:371518437151843715876693Pseudogulbenkiania sp. NH8B, complete genomeacylneuraminate cytidylyltransferase9e-21100
NC_011748:2324495:2339056233905623403211266Escherichia coli 55989, complete genomeNnaC7e-21100
CU928145:2324495:2339056233905623403211266Escherichia coli 55989 chromosome, complete genomeNnaC7e-21100
NC_013960:379461:394754394754395479726Nitrosococcus halophilus Nc4 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-2099.8
NC_007519:3240864:325590732559073256605699Desulfovibrio alaskensis G20 chromosome, complete genomeCMP-N-acetlyneuraminic acid synthetase2e-2099.8
NC_008700:2788363:280171628017162802414699Shewanella amazonensis SB2B, complete genomeN-acylneuraminate cytidylyltransferase2e-2099.4
NC_015276:632206:644601644601645287687Marinomonas mediterranea MMB-1 chromosome, complete genomepseudaminic acid CMP-transferase4e-2098.6
NC_011296:463359:464871464871465566696Thermodesulfovibrio yellowstonii DSM 11347, complete genomeN-acylneuraminate cytidylyltransferase4e-2098.6
NC_016631:1757788:175778817577881758519732Granulicella mallensis MP5ACTX8 chromosome, complete genomeN-acylneuraminate cytidylyltransferase4e-2098.2
NC_012586:922095:939168939168939872705Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpN, acylneuraminate cytidylyltransferase5e-2098.2
NC_020304:3447847:345835534583553459044690Desulfocapsa sulfexigens DSM 10523, complete genomeCMP-N-acetylneuraminic acid synthetase6e-2097.8
NC_008340:2614000:263480226348022635512711Alkalilimnicola ehrlichei MLHE-1, complete genomeacylneuraminate cytidylyltransferase8e-2097.4
NC_007575:601256:607067607067607783717Sulfurimonas denitrificans DSM 1251, complete genomeacylneuraminate cytidylyltransferase1e-1997.1
NC_014844:92148:109741109741110460720Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-1997.1
NC_007796:3351962:336995633699563370636681Methanospirillum hungatei JF-1, complete genomeacylneuraminate cytidylyltransferase2e-1995.9
NC_007955:1664998:166430716643071665023717Methanococcoides burtonii DSM 6242, complete genomeacylneuraminate cytidylyltransferase5e-1994.7
NC_014121:3399685:342113034211303421840711Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePsb35e-1994.7
NC_011750:3584000:3594815359481535960711257Escherichia coli IAI39 chromosome, complete genomeN-acylneuraminate cytidylyltransferase6e-1994.7
NC_012881:4055962:405983640598364060534699Desulfovibrio salexigens DSM 2638, complete genomeN-acylneuraminate cytidylyltransferase1e-1894
NC_007954:1494291:150914415091441509842699Shewanella denitrificans OS217, complete genomeacylneuraminate cytidylyltransferase1e-1894
NC_011769:2248902:225596122559612256725765Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeacylneuraminate cytidylyltransferase9e-1994
NC_011742:3277941:3288485328848532897411257Escherichia coli S88 chromosome, complete genomeN-acylneuraminate cytidylyltransferase1e-1893.6
NC_008563:3362058:3373693337369333749491257Escherichia coli APEC O1, complete genomeacylneuraminate cytidylyltransferase1e-1893.6
NC_007946:3289151:3300786330078633020421257Escherichia coli UTI89, complete genomeacylneuraminate cytidylyltransferase1e-1893.6
NC_010498:3291344:3303368330336833046241257Escherichia coli SMS-3-5, complete genomepolysialic acid capsule biosynthesis N-acylneuraminate cytidylyltransferase NeuA1e-1893.6
NC_011060:514874:523695523695524399705Pelodictyon phaeoclathratiforme BU-1, complete genomeacylneuraminate cytidylyltransferase2e-1892.8
NC_008570:4594436:462784046278404628535696Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeNeuA protein2e-1892.8
NC_020304:2677372:269441126944112695121711Desulfocapsa sulfexigens DSM 10523, complete genomepseudaminic acid CMP-transferase3e-1892.4
NC_016588:133943:158174158174158911738Azospirillum lipoferum 4B plasmid AZO_p6, complete sequenceN-acylneuraminate cytidylyltransferase3e-1892.4
NC_008319:171847:192639192639193391753Synechococcus sp. CC9311, complete genomePosttranslational flagellin modification protein B3e-1892.4
NC_020409:2856481:287291028729102873635726Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCMP-N-acetlyneuraminic acid synthetase3e-1892
NC_015276:632206:639455639455640150696Marinomonas mediterranea MMB-1 chromosome, complete genomeN-acylneuraminate cytidylyltransferase4e-1892
NC_013223:724394:744298744298745020723Desulfohalobium retbaense DSM 5692, complete genomepseudaminic acid CMP-transferase7e-1891.3
NC_016610:1138995:115392011539201154612693Tannerella forsythia ATCC 43037 chromosome, complete genomeputative N-acylneuraminate cytidylyltransferase6e-1891.3
NC_005085:4335333:435492243549224355641720Chromobacterium violaceum ATCC 12472, complete genomeN-acylneuraminate cytidylyltransferase9e-1890.5
NC_007677:771168:798197798197798907711Salinibacter ruber DSM 13855, complete genomeCMP-N-acetlyneuraminic acid synthetase1e-1790.5
NC_015497:1287877:131711313171131317793681Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeacylneuraminate cytidylyltransferase3e-1789
NC_010336:1248071:127539612753961276085690Francisella philomiragia subsp. philomiragia ATCC 25017, completeacylneuraminate cytidylyltransferase9e-1787.4
NC_016112:806256:811118811118811804687Methylomicrobium alcaliphilum chromosome, complete genomeacylneuraminate cytidylyltransferase9e-1787.4
NC_003910:2175305:217876321787632179458696Colwellia psychrerythraea 34H, complete genomeputative acylneuraminate cytidylyltransferase2e-1686.7
NC_013421:3279499:329843432984343299132699Pectobacterium wasabiae WPP163, complete genomepseudaminic acid CMP-transferase5e-1684.7
NC_017515:76861:864748647487160687Neisseria meningitidis M04-240196 chromosome, complete genomeN-acylneuraminate cytidylyltransferase6e-1684.7
NC_010424:14657:256182561826319702Candidatus Desulforudis audaxviator MP104C, complete genomeacylneuraminate cytidylyltransferase8e-1684.3
NC_015732:529201:558638558638559342705Spirochaeta caldaria DSM 7334 chromosome, complete genomeN-acylneuraminate cytidylyltransferase9e-1684
NC_013161:276000:281627281627282304678Cyanothece sp. PCC 8802, complete genomeacylneuraminate cytidylyltransferase2e-1583.2
NC_009699:2875386:2877431287743128790921662Clostridium botulinum F str. Langeland chromosome, complete genomecytidyltransferase-like protein3e-1582
NC_005070:419261:448496448496449197702Synechococcus sp. WH 8102, complete genomePutative acylneuraminate cytidylyltransferase1e-1480.1
NC_011884:5019500:502645450264545027146693Cyanothece sp. PCC 7425, complete genomeN-acylneuraminate cytidylyltransferase3e-1479
NC_008571:2127369:213662021366202137333714Gramella forsetii KT0803, complete genomeN-acylneuraminate cytidylyltransferase4e-1478.6
NC_005363:1604337:162271016227101623402693Bdellovibrio bacteriovorus HD100, complete genomeprobable acylneuraminate cytidylyltransferase7e-1477.8
NC_005139:305420:325292325292325993702Vibrio vulnificus YJ016 chromosome I, complete sequenceCMP-N-acetylneuraminic acid synthetase7e-1477.8
NC_013202:1367447:139115713911571391876720Halomicrobium mukohataei DSM 12286, complete genomeN-acylneuraminate cytidylyltransferase7e-1477.8
NC_008820:91967:115033115033115749717Prochlorococcus marinus str. MIT 9303, complete genomeCMP-N-acetylneuraminic acid synthetase1e-1377.4
NC_015738:1768951:1786875178687517884791605Eggerthella sp. YY7918, complete genomeCMP-N-acetylneuraminic acid synthetase2e-1376.6
NC_015954:1739789:175828717582871759066780Halophilic archaeon DL31 chromosome, complete genomeN-acylneuraminate cytidylyltransferase2e-1376.3
NC_012997:1335902:135636313563631357055693Teredinibacter turnerae T7901, complete genomeN-acylneuraminate cytidylyltransferase4e-1375.1
NC_013204:2234860:2243262224326222449081647Eggerthella lenta DSM 2243, complete genomeacylneuraminate cytidylyltransferase5e-1271.6
NC_007406:2615916:261777226177722618521750Nitrobacter winogradskyi Nb-255, complete genomeacylneuraminate cytidylyltransferase6e-1271.2
NC_007498:1491223:1498715149871514998781164Pelobacter carbinolicus DSM 2380, complete genomeCMP-N-acetylneuraminic acid synthetase2e-1169.7
NC_015145:3236445:3255856325585632571241269Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family2e-1169.7
NC_003552:4637764:4650400465040046515721173Methanosarcina acetivorans C2A, complete genomeacylneuraminate cytidylyltransferase2e-1169.3
NC_007333:1:1375913759149101152Thermobifida fusca YX, complete genomeputative transferase3e-0962.4
NC_015164:4023881:4045369404536940465201152Bacteroides salanitronis DSM 18170 chromosome, complete genome3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family8e-0960.8
NC_014033:522363:539569539569540243675Prevotella ruminicola 23 chromosome, complete genomehypothetical protein8e-0960.8
NC_020304:2677372:272820027282002728907708Desulfocapsa sulfexigens DSM 10523, complete genomeCMP-N-acetylneuraminic acid synthetase1e-0860.1
NC_015276:3669263:367006936700693670758690Marinomonas mediterranea MMB-1 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-0860.1
NC_010170:2374852:239461223946122395232621Bordetella petrii, complete genomeN-acylneuraminate cytidylyltransferase1e-0756.6
NC_017904:3415700:344477334447733445447675Mycobacterium sp. MOTT36Y chromosome, complete genomeacylneuraminate cytidylyltransferase3e-0755.8