Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1347049 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1347049, End: 1348929, Length: 1881

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:368942:3853423853423872221881Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein01289
NC_011094:593100:6122036122036140351833Salmonella enterica subsp. enterica serovar Schwarzengrund strgp6101251
NC_011601:717072:7331137331137349931881Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein01250
NC_014228:3282500:3320813332081333227081896Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein0927
NC_011770:2690501:2706147270614727079761830Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-134479
NC_012856:3615550:3635551363555136373441794Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein1e-122441
NC_014932:1314881:1342912134291213449122001Bartonella clarridgeiae 73, complete genomehypothetical protein5e-109395
NC_012846:2004711:2012361201236120142441884Bartonella grahamii as4aup, complete genomephage related helicase2e-104380
NC_005956:1648000:1658982165898216617412760Bartonella henselae str. Houston-1, complete genomephage related protein3e-73276
NC_010161:2155500:2171501217150121749113411Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-73276
NC_008783:177161:1936551936551960212367Bartonella bacilliformis KC583, complete genomeputative DNA primase/helicase1e-72274
NC_002927:3716894:374834037483403749281942Bordetella bronchiseptica RB50, complete genomephage-related hypothetical protein3e-48193
NC_002927:2338549:235034723503472351288942Bordetella bronchiseptica RB50, complete genomephage-related hypothetical protein3e-48193
NC_010002:2110953:212602521260252126996972Delftia acidovorans SPH-1, complete genomephage-related hypothetical protein8e-41169
NC_018866:1790564:1825568182556818273911824Dehalobacter sp. DCA chromosome, complete genomeDNA primase/helicase1e-1998.2
NC_018867:1837941:1855347185534718571701824Dehalobacter sp. CF chromosome, complete genomeDNA primase/helicase1e-1998.2
NC_016944:1621575:1641139164113916427731635Vibrio cholerae IEC224 chromosome I, complete sequenceDNA primase/helicase9e-1789
NC_002947:2589951:2591620259162025932541635Pseudomonas putida KT2440, complete genomeDNA primase/helicase1e-1689
NC_014834:3130715:3172458317245831740831626Rhodopseudomonas palustris DX-1 chromosome, complete genomeDNA primase6e-1583.2
NC_009937:4122652:4129516412951641311711656Azorhizobium caulinodans ORS 571, complete genomeDNA primase2e-1377.8
NC_014006:994500:9945869945869960341449Sphingobium japonicum UT26S chromosome 1, complete genomeputative phage DNA primase/helicase2e-1068.2
NC_014307:233045:2474232474232495462124Ralstonia solanacearum CFBP2957 chromosome, complete genometoprim domain protein8e-1066.2
NC_010981:242500:2692092692092714562248Wolbachia pipientis, complete genome1e-0862
NC_010981:314745:3426993426993449612263Wolbachia pipientis, complete genome1e-0862
NC_002978:549454:5641755641755662232049Wolbachia endosymbiont of Drosophila melanogaster, complete genomeregulatory protein RepA, putative1e-0758.9
NC_010981:1371265:1390240139024013923992160Wolbachia pipientis, complete genomeputative phage related protein1e-0758.9
NC_012416:573202:6051756051756073702196Wolbachia sp. wRi, complete genomeregulatory protein RepA, putative2e-0758.2
NC_012416:1079661:1111634111163411138292196Wolbachia sp. wRi, complete genomeregulatory protein RepA, putative2e-0758.2
NC_015580:293803:3337553337553347981044Novosphingobium sp. PP1Y, complete genomehypothetical protein3e-0757.8
NC_014209:1487699:1495344149534414973712028Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,regulatory protein DeoR2e-0757.8
NC_009720:5046861:5064301506430150653381038Xanthobacter autotrophicus Py2, complete genomehypothetical protein4e-0757.4
NC_009720:622262:6461966461966472331038Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-0655.8
NC_015186:2931000:2931030293103029320911062Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-0655.5
NC_014220:1162948:1176079117607911781062028Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeregulatory protein DeoR1e-0655.5
NC_014217:2987450:2992130299213029931641035Starkeya novella DSM 506 chromosome, complete genomehypothetical protein1e-0655.5
NC_014220:70490:8699086990890172028Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeregulatory protein DeoR1e-0655.5
NC_014310:1822751:186755518675551868433879Ralstonia solanacearum PSI07 megaplasmid, complete sequence2e-0654.7
NC_003295:856775:8796328796328819292298Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-0653.9
NC_004463:9087290:9089524908952490905911068Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein6e-0653.1