Pre_GI: BLASTP Hits

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Query: NC_011959:972798:985129 Thermomicrobium roseum DSM 5159, complete genome

Start: 985129, End: 985905, Length: 777

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014355:220002:220002220002220778777Candidatus Nitrospira defluvii, complete genomeputative gamma-glutamyl-gamma-aminobutyrate hydrolase4e-40164
NC_014377:1897857:191965019196501920360711Thermosediminibacter oceani DSM 16646 chromosome, complete genomepeptidase C265e-38157
NC_009484:1627734:164069616406961641409714Acidiphilium cryptum JF-5 chromosome, complete genomepeptidase C267e-38157
NC_015186:1698000:171095817109581711671714Acidiphilium multivorum AIU301, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase4e-37155
NC_015275:1480500:148778614877861488511726Clostridium lentocellum DSM 5427 chromosome, complete genomepeptidase C261e-36153
NC_013209:2782500:278251127825112783242732Acetobacter pasteurianus IFO 3283-01, complete genomeglutamine amidotransferases-like5e-35148
NC_017100:2782303:278230327823032783034732Acetobacter pasteurianus IFO 3283-03, complete genomeglutamine amidotransferases-like5e-35148
NC_017108:2779303:277964027796402780371732Acetobacter pasteurianus IFO 3283-12, complete genomeglutamine amidotransferases-like5e-35148
NC_017111:2779321:277965827796582780389732Acetobacter pasteurianus IFO 3283-32, complete genomeglutamine amidotransferases-like5e-35148
NC_017121:2781000:278106027810602781791732Acetobacter pasteurianus IFO 3283-07, complete genomeglutamine amidotransferases-like5e-35148
NC_017125:2782283:278228327822832783014732Acetobacter pasteurianus IFO 3283-22, complete genomeglutamine amidotransferases-like5e-35148
NC_017146:2782325:278232527823252783056732Acetobacter pasteurianus IFO 3283-26, complete genomeglutamine amidotransferases-like5e-35148
NC_017150:2689920:269025726902572690988732Acetobacter pasteurianus IFO 3283-01-42C, complete genomeglutamine amidotransferases-like5e-35148
NC_002678:5060670:507139550713955072105711Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-34145
NC_016048:3983500:399079339907933991542750Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein7e-33140
NC_014376:317312:335049335049335762714Clostridium saccharolyticum WM1 chromosome, complete genomepeptidase C261e-32139
NC_009664:570768:570013570013570771759Kineococcus radiotolerans SRS30216, complete genomepeptidase C264e-32138
NC_018528:2034000:204420920442092044937729Lactobacillus helveticus R0052 chromosome, complete genomeglutamine amidotransferase2e-31135
NC_015172:1002872:100699710069971007710714Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomepeptidase C261e-30133
NC_016818:859181:881704881704882534831Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative glutamine amidotransferase2e-30132
NC_014212:319815:322324322324323025702Meiothermus silvanus DSM 9946 chromosome, complete genomepeptidase C262e-29129
NC_014363:1344768:135216813521681352872705Olsenella uli DSM 7084 chromosome, complete genomepeptidase C262e-29129
NC_015391:448833:452842452842453570729Carnobacterium sp. 17-4 chromosome, complete genomeputative glutamine amidotransferase-like protein5e-29128
NC_013504:1648551:165102516510251651750726Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein5e-29127
NC_013216:3907497:390866439086643909377714Desulfotomaculum acetoxidans DSM 771, complete genomepeptidase C268e-29127
NC_013440:1698047:170826317082631709042780Haliangium ochraceum DSM 14365, complete genomepeptidase C261e-28126
NC_005362:1870620:187203818720381872763726Lactobacillus johnsonii NCC 533, complete genomehypothetical protein1e-28126
NC_014624:224213:236686236686237417732Eubacterium limosum KIST612 chromosome, complete genomeglutamine amidotransferase4e-28125
NC_016027:2047954:210812321081232108863741Gluconacetobacter xylinus NBRC 3288, complete genomeglutamine amidotransferase-like protein4e-28125
NC_014306:3210311:323079832307983231562765Erwinia billingiae Eb661, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase3e-28125
NC_017179:1239991:125711212571121257837726Clostridium difficile BI1, complete genomeputative glutamine amidotransferase7e-28124
NC_013315:1230214:124733412473341248059726Clostridium difficile CD196 chromosome, complete genomeglutamine amidotransferase7e-28124
NC_013316:1225797:124495112449511245676726Clostridium difficile R20291, complete genomeputative glutamine amidotransferase7e-28124
NC_016109:7631165:765330176533017654041741Kitasatospora setae KM-6054, complete genomeputative peptidase C26 family protein3e-27122
NC_014150:3085013:308831930883193089047729Brachyspira murdochii DSM 12563 chromosome, complete genomepeptidase C265e-27121
NC_014623:659422:665443665443666225783Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase c26 family protein4e-27121
NC_008530:1775841:177584117758411776566726Lactobacillus gasseri ATCC 33323, complete genomePredicted glutamine amidotransferase7e-27120
NC_010617:92000:102510102510103250741Kocuria rhizophila DC2201, complete genomehypothetical protein2e-26119
NC_014328:4387303:442473644247364425530795Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative glutamine amidotransferase2e-26119
NC_019908:436000:437568437568438284717Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglutamine amidotransferase1e-25117
NC_014330:195447:220052220052220768717Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative glutamine amidotransferase1e-25116
NC_014727:2010000:201141520114152012164750Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glutamine amidotransferase1e-25116
NC_015186:573289:578939578939579694756Acidiphilium multivorum AIU301, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase4e-25115
NC_018604:789575:792644792644793372729Brachyspira pilosicoli WesB complete genomeputative glutamine amidotransferase4e-25115
NC_014330:2026193:202926120292612029989729Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative glutamine amidotransferase4e-25115
NC_009484:464342:469992469992470786795Acidiphilium cryptum JF-5 chromosome, complete genomepeptidase C263e-25115
NC_018607:662697:665765665765666493729Brachyspira pilosicoli B2904 chromosome, complete genomeglutamine amidotransferase3e-25115
NC_019908:1225690:123919612391961239924729Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglutamine amidotransferase3e-25115
NC_016048:3983500:399157139915713992308738Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-25115
NC_002973:1846000:184601318460131846747735Listeria monocytogenes str. 4b F2365, complete genomeglutamine amidotransferase, class-I2e-25115
NC_010718:2385400:240411924041192405057939Natranaerobius thermophilus JW/NM-WN-LF, complete genomepeptidase C265e-25114
NC_013716:357928:389040389040389804765Citrobacter rodentium ICC168, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase1e-24113
NC_021175:964224:967709967709968401693Streptococcus oligofermentans AS 1.3089, complete genomeglutamine amidotransferase, class I3e-24112
NC_008712:215499:217148217148217942795Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative glutamine amidotransferase3e-24112
NC_010625:1602191:162914216291421629969828Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencepeptidase C268e-24110
NC_014618:1809369:183382318338231834587765Enterobacter cloacae SCF1 chromosome, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase2e-23109
NC_020064:1962172:199219619921961992957762Serratia marcescens FGI94, complete genomeputative glutamine amidotransferase8e-23107
NC_012522:3224526:325091232509123251685774Rhodococcus opacus B4, complete genomepeptidase C26 family protein1e-21103
NC_015136:2282488:229828922982892299185897Burkholderia sp. CCGE1001 chromosome 1, complete sequencepeptidase C264e-21101
NC_015578:3011133:303219730321973032973777Treponema primitia ZAS-2 chromosome, complete genomegamma-glutamyl-gamma-aminobutyrate hydrolase1e-20100
NC_013170:1020339:102551110255111026245735Cryptobacterium curtum DSM 15641, complete genomepredicted glutamine amidotransferase1e-1997.1
NC_007645:3870466:389148238914823892183702Hahella chejuensis KCTC 2396, complete genomepredicted glutamine amidotransferase3e-1995.5
NC_012724:2068588:2093358209335820943711014Burkholderia glumae BGR1 chromosome 1, complete genomePeptidase C263e-1995.5
NC_012560:4929683:494623349462334946985753Azotobacter vinelandii DJ, complete genomeglutamine amidotransferase5e-1994.7
NC_021150:4929670:494622049462204946972753Azotobacter vinelandii CA6, complete genomeglutamine amidotransferase5e-1994.7
NC_008781:4178115:422463342246334225574942Polaromonas naphthalenivorans CJ2, complete genomepeptidase C269e-1994
NC_013722:2810721:282443028244302825290861Xanthomonas albilineans, complete genomeputative predicted glutamine amidotransferases protein6e-1891.3
NC_010627:532407:553322553322554146825Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencepeptidase C262e-1789.4
NC_007705:1388607:139994413999441400804861Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein9e-1787.4
NC_017249:7993713:802981280298128030483672Bradyrhizobium japonicum USDA 6, complete genomeamidotransferase1e-1686.7
NC_008391:2045348:206571020657102066615906Burkholderia cepacia AMMD chromosome 2, complete sequencepeptidase C263e-1685.9
NC_009778:1141716:117102411710241171803780Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1583.6
NC_020260:1184174:121250512125051213284780Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1582.8
NC_015859:1147537:116967811696781170430753Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein3e-1582
NC_015677:3339181:334754333475433348349807Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein9e-1580.9
NC_014166:1008266:100761010076101008296687Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepeptidase C262e-1376.3
NC_007426:930357:952885952885953565681Natronomonas pharaonis DSM 2160, complete genomesugar metabolism cluster protein (predicted glutamine amidotransferase)3e-1065.5
NC_008789:835909:858168858168858806639Halorhodospira halophila SL1, complete genomepeptidase C262e-0756.6
NC_009901:1693500:170709817070981707727630Shewanella pealeana ATCC 700345, complete genomepeptidase C261e-0653.9