Pre_GI: BLASTP Hits

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Query: NC_011593:333488:347362 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 347362, End: 347913, Length: 552

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:333279:347153347153347704552Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator2e-105380
NC_009089:3935500:3960451396045139616411191Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor4e-61233
NC_013798:1778758:1782548178254817837531206Streptococcus gallolyticus UCN34, complete genomeputative transcriptional regulator, Cro/CI family (Tn916)8e-61232
NC_013895:1332832:1365854136585413670591206Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeDNA-binding protein8e-61232
NC_009089:581655:5880105880105892181209Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor4e-60230
NC_016630:1247251:1261191126119112623661176Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator1e-59228
NC_004668:2198027:2259869225986922610531185Enterococcus faecalis V583, complete genometranscriptional regulator, Cro/CI family8e-59226
NC_017347:424500:4411904411904423741185Staphylococcus aureus subsp. aureus T0131 chromosome, completeTranscriptional regulator, Tn9162e-55215
NC_002758:434462:4516344516344528181185Staphylococcus aureus subsp. aureus Mu50, complete genomeputative transcriptional regulator2e-55215
NC_017341:428500:4448524448524460361185Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,replication initiation factor2e-55215
NC_013316:4095905:4107080410708041082011122Clostridium difficile R20291, complete genomeputative conjugative transposon replication initiation factor3e-50197
NC_013315:4015119:4026294402629440274151122Clostridium difficile CD196 chromosome, complete genomeconjugative transposon replication initiation factor3e-50197
NC_017179:4023139:4034314403431440354351122Clostridium difficile BI1, complete genomeconjugative transposon replication initiation factor3e-50197
NC_009089:428075:4493604493604504721113Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor8e-50196
NC_009089:3889811:390677139067713907751981Clostridium difficile 630, complete genomeputative conjugative transposon replication initiation factor9e-38155
CP002207:1:2646264637041059Bacillus atrophaeus 1942, complete genomeputative replication protein; mobile element region1e-23109
NC_014639:1:2646264637041059Bacillus atrophaeus 1942 chromosome, complete genomereplication protein; mobile element region1e-23109
NC_000964:521975:5343345343345353921059Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein9e-24109
NC_009848:582775:5945595945595956591101Bacillus pumilus SAFR-032, complete genometranscriptional regulator8e-2199.8
NC_013450:45782:6541465414665021089Staphylococcus aureus subsp. aureus ED98, complete genomereplication initiation factor family protein3e-1477.8
NC_002952:1349006:1362073136207313630981026Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein1e-1169.3
NC_007793:1633080:1641686164168616427771092Staphylococcus aureus subsp. aureus USA300, complete genomereplication initiation factor family protein2e-1168.9
NC_017347:2724313:2737501273750127386521152Staphylococcus aureus subsp. aureus T0131 chromosome, completeRstA3e-1168.2