Pre_GI: BLASTP Hits

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Query: NC_011149:1870931:1881594 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1881594, End: 1881722, Length: 129

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1083871:109476710947671094895129Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1581.6
NC_011080:1321268:133353413335341333662129Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-1581.6
NC_011083:1323827:133678613367861336914129Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-1581.6
NC_011094:1282385:129839512983951298523129Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1581.3
NC_011205:2024458:203510720351072035235129Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-1579.7
NC_006511:1654959:166477816647781664906129Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-1272
NC_003198:1771432:178211217821121782240129Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1272
NC_004631:1182883:119889211988921199020129Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-1272
NC_011147:1650142:165996116599611660089129Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-1272
NC_016832:1182496:119786411978641197992129Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1272
NC_010102:1779707:179037617903761790483108Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1165.9
NC_016856:1326503:134171813417181341825108Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-1063.5
NC_010067:1655815:166637116663711666568198Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0752.4