Pre_GI: BLASTP Hits

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Query: NC_011083:4547825:4564420 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 4564420, End: 4564617, Length: 198

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3088907:313770131377013137898198Shigella flexneri 2002017 chromosome, complete genomehypothetical protein4e-28123
NC_004337:3049118:309799630979963098193198Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-28123
NC_008253:334467:359668359668359910243Escherichia coli 536, complete genomehypothetical protein7e-28122
NC_013364:3701895:375823437582343758431198Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-27120
NC_011745:3405520:342589034258903426132243Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-27119
NC_011745:5114500:511808851180885118330243Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-27119
NC_013361:5580741:558294855829485583190243Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-27119
NC_008253:3161311:317558731755873175829243Escherichia coli 536, complete genomehypothetical protein5e-27119
NC_013353:3669500:367322336732233673420198Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein9e-27118
AP010958:3669500:367322336732233673420198Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein9e-27118
NC_008253:4817864:483667148366714836913243Escherichia coli 536, complete genomehypothetical protein1e-26118
NC_007946:1119000:114125011412501141447198Escherichia coli UTI89, complete genomehypothetical protein3e-26117
NC_007946:4875997:489621848962184896415198Escherichia coli UTI89, complete genomehypothetical protein2e-26117
NC_011750:4390000:441361544136154414037423Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-26117
NC_004431:4319152:434043343404334340855423Escherichia coli CFT073, complete genomehypothetical protein2e-26117
NC_013716:5201097:521959152195915219788198Citrobacter rodentium ICC168, complete genomehypothetical protein4e-26116
NC_008563:4707826:470782647078264708248423Escherichia coli APEC O1, complete genomehypothetical protein1e-25114
NC_013716:1178383:119352511935251193809285Citrobacter rodentium ICC168, complete genomehypothetical protein1e-23108
NC_012967:3769499:379492337949233795165243Escherichia coli B str. REL606 chromosome, complete genomeAec781e-22104
NC_012947:44512:492724927249469198Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-22103
NC_009801:4882684:488659348865934886769177Escherichia coli E24377A, complete genomehypothetical protein2e-21101
NC_013941:4470932:447460444746044474819216Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1994.7
NC_013008:4643825:464382546438254644022198Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1994.7
NC_002695:4584177:458468045846804584877198Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1994.7
NC_002655:4653160:465366346536634653860198Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L1e-1994.7