Pre_GI: BLASTP Hits

Some Help

Query: NC_010407:3132683:3135160 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3135160, End: 3135693, Length: 534

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:3712272:372537637253763725885510Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator3e-1684.3
NC_011283:819970:835107835107835613507Klebsiella pneumoniae 342 chromosome, complete genomeMarR family transcriptional regulator6e-1683.6
NC_009664:1195630:121911012191101219676567Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, MarR family5e-1373.9
NC_016111:2257166:227261322726132273110498Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional regulator pecS6e-1373.6
NC_009925:5957806:596064059606405961131492Acaryochloris marina MBIC11017, complete genometranscriptional regulator, MarR family6e-1270.5
NC_007951:3631772:364068836406883641305618Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MarR family3e-1167.8
NC_010645:558974:572690572690573193504Bordetella avium 197N, complete genomeMarR-family transcriptional regulator4e-1167.4
NC_013131:4356247:436059143605914361568978Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, MarR family7e-1166.6
NC_014963:1951108:196689019668901967690801Terriglobus saanensis SP1PR4 chromosome, complete genomeregulatory protein MarR3e-1064.7
NC_010501:4989455:499041949904194990925507Pseudomonas putida W619, complete genometranscriptional regulator, MarR family6e-1063.5
NC_007604:1183497:119279211927921193292501Synechococcus elongatus PCC 7942, complete genometranscriptional regulator, MarR family6e-0960.1
NC_006576:414696:427513427513428013501Synechococcus elongatus PCC 6301, complete genometranscriptional regulator6e-0960.1
NC_012721:109500:129270129270129809540Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, MarR family protein1e-0859.3
NC_014307:3240430:325987732598773260389513Ralstonia solanacearum CFBP2957 chromosome, complete genomeMarR family transcriptional regulator1e-0859.3
NC_014311:3348102:336288433628843363396513Ralstonia solanacearum PSI07 chromosome, complete genomeMarR family transcriptional regulator4e-0857.4
NC_008278:613329:613691613691614164474Frankia alni ACN14a, complete genomeputative MarR-family transcriptional regulator3e-0755.1
NC_016582:7033000:703691570369157037463549Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMarR family transcriptional regulator3e-0754.7
NC_021184:3841172:386823438682343868710477Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator8e-0753.1
NC_009921:4757148:477444347744434774919477Frankia sp. EAN1pec, complete genometranscriptional regulator, MarR family1e-0652.8
NC_016745:123772:145693145693146214522Oceanimonas sp. GK1 chromosome, complete genomeMarR family transcriptional regulator2e-0652.4
NC_009668:1591290:159487815948781595342465Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMarR family transcriptional regulator2e-0651.6