Pre_GI: BLASTP Hits

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Query: NC_010001:1884500:1886669 Clostridium phytofermentans ISDg, complete genome

Start: 1886669, End: 1887664, Length: 996

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007907:4926548:493094149309414931462522Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-55214
NC_012778:1819559:182455218245521825064513Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-33142
NC_014328:3823902:382543338254333825870438Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative acetyltransferase1e-21103
NC_004193:375416:464517464517464990474Oceanobacillus iheyensis HTE831, complete genomemutator MutT protein9e-21101
NC_016048:2907702:292992729299272930418492Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein6e-2098.2
NC_014330:1541874:154952715495271550021495Brachyspira pilosicoli 95/1000 chromosome, complete genomenudix hydrolase2e-1997.1
NC_018607:2578433:258792925879292588423495Brachyspira pilosicoli B2904 chromosome, complete genomenudix hydrolase2e-1996.7
NC_018604:233769:241067241067241561495Brachyspira pilosicoli WesB complete genomenudix hydrolase2e-1893.2
NC_014364:4488875:452608945260894526937849Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family5e-1685.5
NC_008497:447427:458363458363458881519Lactobacillus brevis ATCC 367, complete genomeNUDIX family hydrolase6e-1581.6
NC_012781:629761:629761629761630264504Eubacterium rectale ATCC 33656, complete genomehypothetical protein9e-1581.3
NC_013222:2795919:281124528112452811793549Robiginitalea biformata HTCC2501, complete genomeHydrolase of MutT (Nudix) family protein8e-1271.6
NC_013721:820852:830038830038830529492Gardnerella vaginalis 409-05, complete genomehydrolase, NUDIX family5e-1168.9
NC_001263:72681:801228012280637516Deinococcus radiodurans R1 chromosome 1, complete sequenceMutT/nudix family protein7e-1168.6
NC_011083:3171171:318978731897873190332546Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,isopentenyl-diphosphate delta-isomerase2e-1067
NC_015164:1877981:189039018903901890890501Bacteroides salanitronis DSM 18170 chromosome, complete genomeNUDIX hydrolase3e-1066.2
NC_004631:3030580:304661530466153047160546Salmonella enterica subsp. enterica serovar Typhi Ty2, completeisopentenyl-diphosphate delta-isomerase5e-1065.5
NC_003198:3042000:306112030611203061665546Salmonella enterica subsp. enterica serovar Typhi str. CT18,isopentenyl-diphosphate delta-isomerase5e-1065.5
NC_016832:3020000:303525530352553035800546Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Isopentenyl-diphosphate Delta-isomerase5e-1065.5
NC_014934:11341:293742937429922549Cellulophaga algicola DSM 14237 chromosome, complete genomenudix hydrolase1e-0861.2
NC_014121:4299500:432552443255244326066543Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeisopentenyl-diphosphate delta-isomerase9e-0858.2
NC_011283:785973:790648790648791202555Klebsiella pneumoniae 342 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-0757.8
NC_016789:1805503:181121218112121811763552Corynebacterium diphtheriae PW8 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-0757.8
NC_016802:1709840:172077917207791721330552Corynebacterium diphtheriae HC02 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-0757.8
NC_016801:1782401:178811017881101788661552Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-0757.8
NC_009617:1487110:149324314932431493821579Clostridium beijerinckii NCIMB 8052 chromosome, complete genome2e-0757.4
NC_002935:1763886:177152117715211772072552Corynebacterium diphtheriae NCTC 13129, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016782:1745374:175631317563131756864552Corynebacterium diphtheriae 241 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016783:1758319:176402817640281764579552Corynebacterium diphtheriae INCA 402 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016786:1751204:175691317569131757464552Corynebacterium diphtheriae HC01 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016787:1726978:173268717326871733238552Corynebacterium diphtheriae HC03 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016788:1730458:173616717361671736718552Corynebacterium diphtheriae HC04 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016790:1702856:170856517085651709116552Corynebacterium diphtheriae VA01 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_016799:1787687:179620317962031796754552Corynebacterium diphtheriae 31A chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-0756.6
NC_015977:442493:471535471535472086552Roseburia hominis A2-183 chromosome, complete genomeNUDIX hydrolase4e-0755.8
NC_020181:4800298:480192248019224802476555Enterobacter aerogenes EA1509E, complete genomeIsopentenyl-diphosphate delta-isomerase4e-0755.8
NC_009439:794498:814201814201814737537Pseudomonas mendocina ymp, complete genomeNUDIX hydrolase5e-0755.5
NC_016612:477407:501759501759502307549Klebsiella oxytoca KCTC 1686 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase9e-0754.7
NC_014830:3870000:388680738868073887445639Intrasporangium calvum DSM 43043 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-0654.3
NC_015167:313506:328594328594329142549Cellulophaga lytica DSM 7489 chromosome, complete genomeNUDIX hydrolase3e-0653.1
NC_016629:3396500:340510634051063405669564Desulfovibrio africanus str. Walvis Bay chromosome, completeNUDIX hydrolase3e-0652.8
NC_020409:437781:472513472513473049537Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeNUDIX hydrolase7e-0652