Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2543133 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2543133, End: 2543642, Length: 510

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2580774:258429925842992585087789Escherichia coli KO11FL chromosome, complete genomeParB domain-containing protein nuclease2e-38158
CP002516:2580774:258429925842992585087789Escherichia coli KO11, complete genomeParB domain protein nuclease2e-38158
NC_008563:1475500:148710414871041487895792Escherichia coli APEC O1, complete genomeputative transcriptional regulator4e-38157
NC_014310:1822751:186556618655661866315750Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein3e-29127
NC_011386:931140:9565829565829579871406Oligotropha carboxidovorans OM5, complete genome6e-28123
NC_014922:825396:8510208510208523751356Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein6e-28123
NC_015422:2078618:2107316210731621087311416Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-27122
NC_011958:976500:1005431100543110068071377Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA modification methylase1e-27122
NC_009659:3103601:3102180310218031036041425Janthinobacterium sp. Marseille chromosome, complete genomephage related DNA methyltransferase6e-27119
NC_011420:36272:4879748797500351239Rhodospirillum centenum SW, complete genomeDNA methylase, putative2e-26118
NC_003296:673790:710925710925711593669Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-26118
NC_016625:1259778:1260363126036312616371275Burkholderia sp. YI23 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain-containing protein3e-26117
NC_016026:1969766:1978706197870619800371332Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDNA methylase family protein4e-26117
NC_014393:4775452:4810611481061148118671257Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-25114
NC_017082:532000:5490945490945503591266Bradyrhizobium sp. S23321, complete genomehypothetical protein7e-25113
NC_015422:2078618:2108728210872821099901263Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-25113
AC_000091:1407693:142709114270911427354264Escherichia coli W3110 DNA, complete genomehypothetical protein1e-24112
NC_010473:1493983:151279715127971513060264Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; conserved protein1e-24112
NC_000913:1404000:142340114234011423664264Escherichia coli K12, complete genomeRac prophage; conserved protein1e-24112
NC_012759:1296000:131546013154601315723264Escherichia coli BW2952 chromosome, complete genomeRac prophage protein1e-24112
NC_009659:3103601:3103601310360131048361236Janthinobacterium sp. Marseille chromosome, complete genomeDNA modification methylase4e-24110
NC_013722:2848366:2849628284962828509261299Xanthomonas albilineans, complete genomeputative adn methyltransferase protein4e-24110
NC_015593:1587684:1590233159023315915491317Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein6e-24110
NC_014217:3024961:303590830359083036861954Starkeya novella DSM 506 chromosome, complete genomehypothetical protein7e-24109
NC_014034:1036652:103761910376191038395777Rhodobacter capsulatus SB1003 chromosome, complete genomeParB domain-containing protein nuclease7e-24109
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-23108
NC_010337:2848360:2893873289387328951051233Heliobacterium modesticaldum Ice1, complete genomeDNA methylase3e-23107
NC_009633:2592000:2615672261567226169461275Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-23107
NC_012947:2366000:237523323752332375628396Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeParB domain protein nuclease5e-23107
NC_012967:1403733:142025714202571420688432Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-23107
NC_011958:976500:100417210041721005065894Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-65e-22103
NC_016641:2587000:2603244260324426045091266Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-1995.9
NC_014632:1112733:1138770113877011400261257Ilyobacter polytropus DSM 2926 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-1995.5
NC_011420:36272:4740747407487921386Rhodospirillum centenum SW, complete genomeDNA methylase, putative2e-1995.1
NC_010084:2484000:2488925248892524901901266Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein2e-1891.3
NC_010804:996837:1034583103458310358481266Burkholderia multivorans ATCC 17616 chromosome 1, completeputative DNA methylase2e-1891.3
NC_013171:896802:910865910865911455591Anaerococcus prevotii DSM 20548, complete genomeParB domain protein nuclease9e-1889.4
NC_009617:1897887:1913872191387219151041233Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-1685.5
NC_003485:1450045:147796114779611478479519Streptococcus pyogenes MGAS8232, complete genomehypothetical protein3e-1684.3
NC_010644:1039576:1058326105832610595161191Elusimicrobium minutum Pei191, complete genomenuclease2e-1581.6
NC_007296:1230614:125515812551581255676519Streptococcus pyogenes MGAS6180, complete genomeParB-like protein1e-1479.3
NC_004606:623853:638522638522639040519Streptococcus pyogenes SSI-1, complete genomehypothetical protein1e-1479.3
NC_002737:533291:5450875450875462531167Streptococcus pyogenes M1 GAS, complete genomeconserved hypothetical protein, phage associated1e-1479
NC_012416:573202:5984745984745997001227Wolbachia sp. wRi, complete genomeDNA methylase2e-1478.6
NC_012416:1079661:1104933110493311061591227Wolbachia sp. wRi, complete genomeDNA methylase2e-1478.6
NC_002978:549454:5722595722595734851227Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW4, DNA methylase2e-1478.6
NC_012471:141463:1552281552281563941167Streptococcus equi subsp. equi 4047, complete genomephage DNA methylase4e-1477.4
NC_014365:2843126:2846724284672428479111188Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease5e-1477
NC_008751:1043269:1077549107754910796032055Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeParB domain protein nuclease9e-1476.3
NC_010172:798923:8671778671778686431467Methylobacterium extorquens PA1, complete genomeDNA methylase N-4/N-6 domain protein1e-1375.9
NC_012988:769981:8472298472298487131485Methylobacterium extorquens DM4, complete genomephage methyltransferase1e-1375.9
NC_014365:2888897:2887701288770128889001200Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease1e-1375.5
NC_015558:1813500:1821200182120018223001101Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein2e-1375.1
NC_010981:1371265:1388212138821213894441233Wolbachia pipientis, complete genomePhage related DNA methylase2e-1271.6
NC_010981:242500:2620412620412632731233Wolbachia pipientis, complete genomePhage related DNA methylase2e-1271.6
NC_010981:314745:3355613355613367931233Wolbachia pipientis, complete genomePhage related DNA methylase2e-1271.6
NC_002978:234082:2486082486082498371230Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW1, DNA methylase9e-1269.3
NC_013170:311045:3330583330583342901233Cryptobacterium curtum DSM 15641, complete genomeParB-like nuclease5e-1167
NC_008358:2638245:2697509269750926988611353Hyphomonas neptunium ATCC 15444, complete genomeDNA methylase8e-1063.2
NC_008530:646207:653763653763654047285Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain2e-0961.6
NC_007432:654904:6757886757886770261239Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA methylase7e-0856.6
NC_010084:2484000:2487717248771724889281212Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein3e-0754.7
NC_008530:1454118:1470694147069414719201227Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain and DNA modification methylase domain4e-0754.3
NC_012471:1197534:127022612702261271191966Streptococcus equi subsp. equi 4047, complete genomeParB-like nuclease protein1e-0652.4
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-0651.6