Pre_GI: BLASTN Hits

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Query: NC_009512:4375452 Pseudomonas putida F1, complete genome

Start: 4375452, End: 4405394, Length: 29943

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:5002595*5002595502209219498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-106394BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome2e-72281BLASTN svgBLASTP svg
NC_010501:15189591518959154333524377Pseudomonas putida W619, complete genome2e-38168BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome3e-34155BLASTN svgBLASTP svg
NC_010501:54420005442000546540823409Pseudomonas putida W619, complete genome1e-30143BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome2e-29139BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009512:1691930*1691930171807626147Pseudomonas putida F1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013171:18080001808000183128023281Anaerococcus prevotii DSM 20548, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002939:1601706*1601706162134919644Geobacter sulfurreducens PCA, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome4e-0661.9BLASTN svgBLASTP svg