Pre_GI: BLASTP Hits

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Query: NC_009512:3334579:3342578 Pseudomonas putida F1, complete genome

Start: 3342578, End: 3344365, Length: 1788

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:2581324:2624808262480826265351728Pseudomonas putida S16 chromosome, complete genomerelaxase0846
NC_017986:409899:4169414169414186681728Pseudomonas putida ND6 chromosome, complete genomerelaxase0830
NC_010501:3671517:3679488367948836811971710Pseudomonas putida W619, complete genomeRelaxase0821
NC_012660:2045398:2091920209192020936441725Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein0649
NC_016830:3869572:3883326388332638850501725Pseudomonas fluorescens F113 chromosome, complete genomerelaxase0644
NC_007492:3462929:3471454347145434731811728Pseudomonas fluorescens PfO-1, complete genomehypothetical protein4e-179628
NC_008825:2564965:2568977256897725708151839Methylibium petroleiphilum PM1, complete genomehypothetical protein5e-152538
NC_015740:1291739:1291739129173912935951857Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-151535
NC_011662:1017933:1022284102228410241341851Thauera sp. MZ1T, complete genomeRelaxase5e-151535
NC_006513:1379735:1423016142301614248301815Azoarcus sp. EbN1, complete genomehypothetical protein1e-150534
NC_012912:483390:4914434914434932421800Dickeya zeae Ech1591, complete genomeRelaxase3e-150532
NC_008782:1308007:1323801132380113256841884Acidovorax sp. JS42, complete genomeRelaxase2e-146519
NC_008344:49039:6932869328711931866Nitrosomonas eutropha C91, complete genomeRelaxase2e-146519
NC_012691:2614603:2677917267791726797731857Tolumonas auensis DSM 9187, complete genomeRelaxase1e-145516
NC_014640:1179382:1185130118513011870071878Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein5e-145514
NC_013421:1744928:1754222175422217560031782Pectobacterium wasabiae WPP163, complete genomeRelaxase6e-145514
NC_010170:1152131:1155741115574111576031863Bordetella petrii, complete genomeputative helicase1e-142507
NC_015726:2862500:2869564286956428714081845Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein1e-141503
NC_010002:4572573:4579413457941345812661854Delftia acidovorans SPH-1, complete genomeRelaxase6e-141501
NC_015379:2417312:2429114242911424309311818Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-140500
NC_010688:2850164:2856463285646328583911929Xanthomonas campestris pv. campestris, complete genomehypothetical protein6e-140498
NC_010170:1551923:1557786155778615596331848Bordetella petrii, complete genomeputative helicase6e-139494
NC_002488:1638946:1671676167167616735261851Xylella fastidiosa 9a5c, complete genomehypothetical protein6e-139494
NC_014910:4207227:4208814420881442106761863Alicycliphilus denitrificans BC chromosome, complete genomerelaxase2e-136486
NC_004129:5481629:5489951548995154918371887Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-136485
NC_009656:4527457:4655680465568046576111932Pseudomonas aeruginosa PA7 chromosome, complete genomerelaxase4e-136485
NC_009656:4527457:4570189457018945721081920Pseudomonas aeruginosa PA7 chromosome, complete genomerelaxase5e-135481
NC_004578:895019:9009889009889029161929Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-133477
NC_021150:3698696:3718383371838337202781896Azotobacter vinelandii CA6, complete genomeRelaxase-related protein3e-133476
NC_012560:3698697:3718384371838437202791896Azotobacter vinelandii DJ, complete genomeRelaxase-related protein3e-133476
NC_007005:1605000:1609367160936716112711905Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF1528:Relaxase4e-133475
NC_010067:3056774:3073338307333830749571620Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-100364
NC_014532:3596097:3630268363026836321421875Halomonas elongata DSM 2581, complete genomerelaxase6e-99362
NC_003902:3666544:3697611369761136986331023Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein8e-95348
NC_007086:1224867:1249163124916312501851023Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein8e-95348
NC_012913:1041969:1061129106112910630151887Aggregatibacter aphrophilus NJ8700, complete genomerelaxase3e-94346
NC_009648:5119271:5133416513341651350051590Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-93344
NC_012731:560199:5776945776945792861593Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-93343
NC_013716:3512950:3518153351815335197721620Citrobacter rodentium ICC168, complete genomehypothetical protein8e-92338
NC_009434:3611738:3686311368631136875551245Pseudomonas stutzeri A1501, complete genomeHD-superfamily hydrolase2e-87323
NC_007005:830467:838293838293839249957Pseudomonas syringae pv. syringae B728a, complete genomeRelaxase9e-81301
NC_011149:4677412:4680855468085546821711317Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-71269
NC_018691:2214464:2216028221602822178421815Alcanivorax dieselolei B5 chromosome, complete genomeRelaxase1e-67257
NC_008739:41793:5382653826557001875Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequenceRelaxase3e-62239
NC_009792:3245368:3263530326353032647921263Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-52205
NC_016616:2699350:2732315273231527343001986Dechlorosoma suillum PS chromosome, complete genomeputative HD superfamily hydrolase2e-36154
NC_013416:820989:826945826945827487543Aggregatibacter actinomycetemcomitans D11S-1, complete genomerelaxase5e-29129
NC_009832:4564752:4573178457317845748871710Serratia proteamaculans 568, complete genomeRelaxase7e-28125
NC_009832:4482500:4487979448797944896611683Serratia proteamaculans 568, complete genomeRelaxase3e-27124
NC_007005:830467:837344837344838102759Pseudomonas syringae pv. syringae B728a, complete genome9e-27122
NC_016845:4498097:4504028450402845053171290Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein5e-26119
NC_014029:331919:3999813999814016901710Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-24115
NC_009832:426993:4482924482924500041713Serratia proteamaculans 568, complete genomeRelaxase2e-24114
NC_008463:4566976:458907845890784589455378Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-23112
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein5e-2099.8
NC_012125:4559990:4575681457568145772461566Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-2099
NC_016832:4482437:4498105449810544996941590Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-2099
NC_003198:4513900:4527028452702845286171590Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-2099
NC_004631:4494000:4509837450983745114261590Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-2099
NC_013421:701005:7426947426947441511458Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15287e-1995.9
NC_010554:2646806:2702478270247827046282151Proteus mirabilis HI4320, complete genomeplasmid conjugative relaxase3e-1893.6
NC_009801:3374501:3374501337450133761561656Escherichia coli E24377A, complete genomehelicase/Zfx / Zfy transcription activation region domain protein3e-1687.4
NC_014228:3391500:339158733915873392480894Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-1687.4
NC_007508:3865000:387247438724743872746273Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein4e-1583.6
NC_009792:3245368:326495832649583265317360Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-1583.2
NC_013892:1503162:151686915168691517762894Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-1481.6
NC_007950:206474:2241102241102259451836Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein3e-1377.4
NC_012880:3529017:3551393355139335528291437Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF15282e-1275.1
NC_005126:1315474:1348802134880213503341533Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1274.7
NC_011035:829945:8878478878478903992553Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeTraI2e-1274.3
NC_016513:1126263:113454411345441134873330Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completerelaxase6e-1272.8
NC_014394:993465:9934659934659954111947Gallionella capsiferriformans ES-2 chromosome, complete genomeRelaxase6e-1272.8
NC_014228:2270000:231586323158632316630768Xenorhabdus nematophila ATCC 19061, complete genome7e-1066.2
NC_004547:667988:6856966856966872941599Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-0965.5
NC_010554:2789722:2795085279508527966771593Proteus mirabilis HI4320, complete genomehelicase2e-0964.7
NC_012779:346998:3771273771273787191593Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0862
NC_007298:2769525:2795589279558927972381650Dechloromonas aromatica RCB, complete genomeRelaxase4e-0860.5
NC_012214:537000:5558525558525573541503Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-0757.8
NC_015422:2858228:2922511292251129242741764Alicycliphilus denitrificans K601 chromosome, complete genomeRelaxase6e-0756.2
NC_016816:4129299:4129299412929941308431545Pantoea ananatis LMG 5342, complete genomeputative helicase/relaxase7e-0756.2