Pre_GI: BLASTP Hits

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Query: NC_009381:3596000:3607678 Yersinia pestis Pestoides F chromosome, complete genome

Start: 3607678, End: 3607836, Length: 159

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3982020:399258839925883992746159Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-23107
NC_004088:4116676:412724441272444127402159Yersinia pestis KIM, complete genomehypothetical protein2e-23107
NC_005810:4224500:423367942336794233837159Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-23107
NC_010159:809663:821272821272821430159Yersinia pestis Angola, complete genomehypothetical protein2e-23107
NC_008150:4561633:456943845694384569596159Yersinia pestis Antiqua, complete genomehypothetical protein2e-23107
NC_008149:402599:410405410405410563159Yersinia pestis Nepal516, complete genomehypothetical protein2e-23107
NC_009708:3903598:391416739141673914325159Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-22103