Pre_GI: BLASTP Hits

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Query: NC_009092:1504363:1539395 Shewanella loihica PV-4, complete genome

Start: 1539395, End: 1540132, Length: 738

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015589:1240197:125271712527171253454738Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-45182
NC_010674:828191:844615844615845397783Clostridium botulinum B str. Eklund 17B, complete genomespore coat polysaccharide biosynthesis protein F9e-42170
NC_010424:1857062:186262418626241863355732Candidatus Desulforudis audaxviator MP104C, complete genomeacylneuraminate cytidylyltransferase1e-41169
NC_014624:2478985:248658124865812487345765Eubacterium limosum KIST612 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-38159
NC_014761:2189500:220440922044092205161753Oceanithermus profundus DSM 14977 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-37155
NC_019897:128610:187108187108187842735Thermobacillus composti KWC4 chromosome, complete genomespore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase4e-37154
NC_010723:801215:820946820946821728783Clostridium botulinum E3 str. Alaska E43, complete genomespore coat polysaccharide biosynthesis protein SpsF9e-37153
NC_018876:2277160:228138522813852282125741Methanolobus psychrophilus R15 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-36153
NC_020291:4944835:495019849501984950854657Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomespore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase3e-35148
NC_012856:604767:619070619070619840771Ralstonia pickettii 12D chromosome 1, complete genomeacylneuraminate cytidylyltransferase2e-34145
NC_007298:1334876:1350223135022313522502028Dechloromonas aromatica RCB, complete genomeAcylneuraminate cytidylyltransferase:Aminotransferase class-III4e-34144
NC_005071:87907:115677115677116495819Prochlorococcus marinus str. MIT 9313, complete genomeSurface polysaccharide biosynthesis protein, possible cytidylyltransferase7e-34144
NC_015437:27325:548025480255557756Selenomonas sputigena ATCC 35185 chromosome, complete genomeacylneuraminate cytidylyltransferase7e-34144
NC_009138:1138917:1141913114191311439402028Herminiimonas arsenicoxydans, complete genomeputative bifunctionnal protein : Glutamate-1-semialdehyde 2,1-aminomutase, 3-deoxy-manno-octulosonate cytidylyltransferase1e-33143
NC_013522:698114:714656714656715450795Thermanaerovibrio acidaminovorans DSM 6589, complete genomeacylneuraminate cytidylyltransferase1e-33142
NC_014915:3259440:326607732660773266802726Geobacillus sp. Y412MC52 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-32139
NC_013411:3251500:326010832601083260833726Geobacillus sp. Y412MC61, complete genomeacylneuraminate cytidylyltransferase2e-32139
NC_007517:480303:5006795006795024601782Geobacter metallireducens GS-15, complete genomeAcylneuraminate cytidylyltransferase2e-32139
NC_020210:3169258:317919231791923179917726Geobacillus sp. GHH01, complete genomeputative acylneuraminate cytidylyltransferase3e-32138
NC_007513:75197:925869258693320735Synechococcus sp. CC9902, complete genomehypothetical protein9e-31133
NC_007513:75197:9053790537925852049Synechococcus sp. CC9902, complete genomeGlutamate-1-semialdehyde aminotransferase-like1e-28126
NC_014650:376070:393017393017393739723Geobacillus sp. Y4.1MC1 chromosome, complete genomeacylneuraminate cytidylyltransferase3e-28125
NC_020409:1407857:141187214118721412588717Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeAcylneuraminate cytidylyltransferase4e-28124
NC_013223:724394:7389947389947408291836Desulfohalobium retbaense DSM 5692, complete genomeacylneuraminate cytidylyltransferase4e-28124
NC_018643:1037456:1040216104021610422642049Alpha proteobacterium HIMB5 chromosome, complete genomeCytidylyltransferase,Aminotransferase class-III2e-26119
NC_009767:997500:101536210153621016000639Roseiflexus castenholzii DSM 13941, complete genomeacylneuraminate cytidylyltransferase2e-26119
NC_009725:3602632:361790236179023618645744Bacillus amyloliquefaciens FZB42, complete genomeSpsF2e-22106
NC_008508:1382036:1387467138746713891131647Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Dehydrogenase2e-22106
NC_008510:1339926:1345348134534813469941647Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Dehydrogenase2e-22106
NC_008508:1382036:139774713977471398475729Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Cytidylyltransferase3e-21102
NC_008510:1339926:135562813556281356356729Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Cytidylyltransferase3e-21102
NC_018607:1251357:125983312598331260513681Brachyspira pilosicoli B2904 chromosome, complete genomespore coat polysaccharide biosynthesis protein2e-1893.2
NC_011663:1627220:1640970164097016426761707Shewanella baltica OS223 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-1892.8
NC_009052:3467000:3479160347916034808661707Shewanella baltica OS155, complete genomeacylneuraminate cytidylyltransferase6e-1891.3
NC_019908:700000:711857711857712537681Brachyspira pilosicoli P43/6/78 chromosome, complete genomespore coat polysaccharide biosynthesis protein F6e-1891.3
NC_018604:1489567:149755214975521498232681Brachyspira pilosicoli WesB complete genomespore coat polysaccharide biosynthesis protein F6e-1891.3
NC_014330:2520906:252814325281432528832690Brachyspira pilosicoli 95/1000 chromosome, complete genomespore coat polysaccharide biosynthesis protein F6e-1890.9
NC_015666:1672740:168533116853311685996666Halopiger xanaduensis SH-6 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-1789.4
NC_013159:148180:169250169250169990741Saccharomonospora viridis DSM 43017, complete genomespore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase1e-1479.7
NC_014032:825793:846417846417847223807Salinibacter ruber M8 chromosome, complete genomeSpore coat polysaccharide biosynthesis protein spsF2e-1272.4
NC_017506:2504746:2528222252822225298531632Marinobacter adhaerens HP15 chromosome, complete genomealdo/keto reductase2e-1169.3
NC_008700:1994829:200509720050972005834738Shewanella amazonensis SB2B, complete genome3-deoxy-manno-octulosonate cytidylyltransferase1e-1066.6
NC_016937:1525914:152994815299481530700753Francisella tularensis subsp. tularensis TI0902 chromosome,3-deoxy-manno-octulosonate cytidylyltransferase3e-1065.5
NC_016933:1601821:160585516058551606607753Francisella tularensis TIGB03 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase3e-1065.5
NC_008245:1525877:152991115299111530663753Francisella tularensis subsp. tularensis FSC 198, complete genome3-deoxy-D-manno-octulosonate cytidyltransferase3e-1065.5
NC_006570:1526071:153010515301051530857753Francisella tularensis subsp. tularensis Schu 4, complete genome3-deoxy-manno-octulosonate cytidylyltransferase4e-1065.1
NC_008321:2190000:219947021994702200207738Shewanella sp. MR-4, complete genome3-deoxy-D-manno-octulosonate cytidylyltransferase5e-1064.7
NC_011899:1807365:181828518182851819085801Halothermothrix orenii H 168, complete genome3-deoxy-manno-octulosonate cytidylyltransferase1e-0963.2
NC_007908:1328832:133744713374471338217771Rhodoferax ferrireducens T118, complete genome3-deoxy-manno-octulosonate cytidylyltransferase2e-0756.2
NC_020418:603750:618493618493619125633Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-0755.8
NC_012108:2065355:207727220772722078006735Desulfobacterium autotrophicum HRM2, complete genomeKdsB1e-0653.9
NC_007946:3289151:329310032931003293840741Escherichia coli UTI89, complete genome3-deoxy-manno-octulosonate cytidylyltransferase1e-0653.5
NC_008563:3362058:336600733660073366747741Escherichia coli APEC O1, complete genome3-deoxy-manno-octulosonate cytidylyltransferase KpsU1e-0653.5
NC_011742:3277941:328079932807993281539741Escherichia coli S88 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase1e-0653.5
NC_012660:4149487:416608641660864166850765Pseudomonas fluorescens SBW25 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase2e-0653.1
NC_009512:4375452:4391758439175843930441287Pseudomonas putida F1, complete genome3-deoxy-D-manno-octulosonate cytidylyltransferase2e-0653.1
NC_013456:145171:164956164956165714759Vibrio sp. Ex25 chromosome 1, complete genome3-deoxy-manno-octulosonate cytidylyltransferase3e-0652.4
NC_011751:3530954:353381235338123534552741Escherichia coli UMN026 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase3e-0652.4
NC_008253:3161311:318199331819933182733741Escherichia coli 536, complete genome3-deoxy-manno-octulosonate cytidylyltransferase3e-0652.4
NC_011745:3511600:351554935155493516289741Escherichia coli ED1a chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase3e-0652