Pre_GI: BLASTP Hits

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Query: NC_008751:607209:628309 Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome

Start: 628309, End: 630213, Length: 1905

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007503:1111457:1160849116084911621261278Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-90334
NC_020911:3046916:3061821306182130631041284Octadecabacter antarcticus 307, complete genomeputative TRAP transporter large permease DctM subunit2e-78293
NC_014624:2668157:2717023271702327183151293Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein9e-78291
NC_012108:946314:9669809669809682571278Desulfobacterium autotrophicum HRM2, complete genomeDctM22e-73277
NC_014011:1760793:1792999179299917942821284Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-73276
NC_013223:2609697:2636861263686126381651305Desulfohalobium retbaense DSM 5692, complete genomeTRAP dicarboxylate transporter, DctM subunit8e-71268
NC_015458:1692401:1697018169701816983161299Pusillimonas sp. T7-7 chromosome, complete genomeputative inner membrane protein1e-69264
NC_015914:2230076:2252067225206722533411275Cyclobacterium marinum DSM 745 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM4e-69263
NC_017187:325229:3418083418083430881281Arcobacter butzleri ED-1, complete genomeC4-dicarboxylate transport protein6e-69262
NC_014532:2664139:2676699267669926779671269Halomonas elongata DSM 2581, complete genomeTRAP transporter large transmembrane protein2e-68260
NC_015573:162000:1738181738181750981281Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM3e-64246
NC_015224:1914833:1919407191940719206991293Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative C4-dicarboxylate transporter, large subunit7e-64245
NC_015152:2887414:2898767289876729000351269Spirochaeta sp. Buddy chromosome, complete genomeTRAP dicarboxylate transporter DctM subunit2e-62240
NC_020908:1920169:1931692193169219329661275Octadecabacter arcticus 238, complete genomeTRAP transporter DctM subunit2e-61237
NC_010634:1916000:1951154195115419524461293Yersinia pseudotuberculosis PB1/+, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-61236
NC_006155:1916426:1951170195117019524621293Yersinia pseudotuberculosis IP 32953, complete genomeTRAP-T family C4-dicarboxylate transporter, large (DctM) subunit3e-61236
NC_009457:1444449:1480233148023314815161284Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-59230
NC_012578:1838470:1874263187426318755461284Vibrio cholerae M66-2 chromosome I, complete sequenceSialic acid TRAP transporter,large permease2e-59230
NC_012668:1688500:1719095171909517203781284Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system large permease component2e-59230
NC_016445:1363831:1398530139853013998131284Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-59230
NC_017270:1755552:1765881176588117671641284Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, large permease2e-59230
NC_003911:1791878:1838069183806918393461278Silicibacter pomeroyi DSS-3, complete genomeTRAP dicarboxylate transporter, DctM subunit6e-59229
NC_006510:1995916:2016959201695920182421284Geobacillus kaustophilus HTA426, complete genometransporter9e-59228
NC_014206:1618988:1620632162063216219151284Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM9e-59228
NC_007644:416000:4272074272074284871281Moorella thermoacetica ATCC 39073, complete genomeTRAP dicarboxylate transporter- DctM subunit1e-58228
NC_007778:3784104:3806304380630438075961293Rhodopseudomonas palustris HaA2, complete genomeTRAP dicarboxylate transporter DctM subunit1e-57224
NC_015565:1511426:1526543152654315278231281Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctM2e-57223
NC_011992:1968258:1996155199615519974351281Acidovorax ebreus TPSY, complete genomeTRAP dicarboxylate transporter, DctM subunit7e-57222
NC_014532:2298628:2308166230816623094641299Halomonas elongata DSM 2581, complete genomepossible integral membrane transport protein8e-56218
NC_016048:3856665:3864869386486938661491281Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter1e-55218
NC_015589:2447132:2451124245112424524041281Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAP dicarboxylate transporter DctM subunit2e-55217
NC_007963:1190847:1213144121314412144241281Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit5e-55216
NC_019978:2532640:2544611254461125459001290Halobacteroides halobius DSM 5150, complete genomeTRAP transporter, DctM subunit4e-55216
NC_016901:3430401:3449243344924334506401398Shewanella baltica OS678 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM2e-54214
NC_009997:3483157:3502031350203135034281398Shewanella baltica OS195, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-54214
NC_014532:2989185:3002435300243530037181284Halomonas elongata DSM 2581, complete genomeTRAP transporter large transmembrane protein4e-54213
NC_007963:2777066:2783855278385527851351281Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit7e-54212
NC_016048:308342:3413263413263426121287Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter8e-54212
NC_009654:304000:3171453171453184221278Marinomonas sp. MWYL1, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-53210
NC_016593:762216:7912007912007924771278Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTRAP dicarboxylate transporter subunit DctM3e-53210
NC_003454:1889529:1912010191201019132961287Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeC4-dicarboxylate transporter large subunit2e-52207
NC_013740:2218215:2230154223015422314521299Acidaminococcus fermentans DSM 20731, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-52207
NC_020210:661236:6747896747896760661278Geobacillus sp. GHH01, complete genomeTRAP dicarboxylate transporter DctM subunit6e-52206
NC_015500:78223:1043021043021056001299Treponema brennaborense DSM 12168 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit7e-52205
NC_014219:999648:1022714102271410239851272Bacillus selenitireducens MLS10 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit9e-52205
NC_015730:921735:9232579232579245611305Roseobacter litoralis Och 149 chromosome, complete genomeTRAP transporter subunit DctM2e-51204
NC_016513:1761830:1770128177012817714291302Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative tRAP C4-dicarboxylate transport system permease DctM subunit2e-50201
NC_014041:3197192:3201402320140232026911290Zunongwangia profunda SM-A87 chromosome, complete genomedctM-like transporter3e-50200
NC_020302:85821:1312051312051325181314Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein6e-49196
NC_008212:1386834:1410746141074614120441299Haloquadratum walsbyi DSM 16790, complete genomeTRAP-type C4-dicarboxylate transport system,large permease component DctM (YiaN)3e-47190
NC_004337:3590323:3726551372655137278431293Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-46186
NC_016642:1913432:1934315193431519356101296Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM8e-46185
NC_016048:3667890:3677840367784036791261287Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter4e-45183
NC_011661:1807101:1807101180710118083841284Dictyoglomus turgidum DSM 6724, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-44181
NC_011892:352652:3636273636273655581932Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTRAP dicarboxylate transporter, DctM subunit1e-44181
NC_009439:4404942:4425205442520544265001296Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-43177
NC_015519:1888917:1888917188891718902061290Tepidanaerobacter sp. Re1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM6e-43176
NC_016642:1990684:2007838200783820091601323Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM9e-43175
NC_007963:3574000:3580097358009735813891293Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-42174
NC_014011:1354261:1369461136946113707501290Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit7e-42172
NC_020911:3159290:3159290315929031606181329Octadecabacter antarcticus 307, complete genomeTRAP transporter large permease subunit DctM2e-41170
NC_008209:695269:7138507138507151451296Roseobacter denitrificans OCh 114, complete genomeTRAP-type C4-dicarboxylate transport protein, permease component3e-40167
NC_008209:1385094:1400878140087814021941317Roseobacter denitrificans OCh 114, complete genomeTrapT family, DctM subunit, putative3e-40167
NC_015458:2614108:2627049262704926283291281Pusillimonas sp. T7-7 chromosome, complete genomeintegral membrane protein4e-40166
NC_013416:1429881:143615714361571437140984Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTRAP dicarboxylate transporter, DctM subunit4e-39163
NC_021066:3028421:3046182304618230480561875Raoultella ornithinolytica B6, complete genomehypothetical protein5e-37156
NC_008260:2442000:2453494245349424547741281Alcanivorax borkumensis SK2, complete genomeTRAP-type C4-dicarboxylate transport system,large permease component1e-36155
NC_016629:3789554:3829995382999538313081314Desulfovibrio africanus str. Walvis Bay chromosome, completeTRAP dicarboxylate transporter subunit DctM8e-36152
NC_009142:5647737:5647737564773756490411305Saccharopolyspora erythraea NRRL 2338, complete genomeC4-dicarboxylate transport system (permease large protein)3e-34147
NC_008392:666000:6847736847736861251353Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctM subunit3e-33143
NC_010506:2146444:2157756215775621590421287Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter, DctM subunit6e-33142
NC_004193:3530000:3540725354072535420321308Oceanobacillus iheyensis HTE831, complete genomeC4-dicarboxylate transport system permease large protein7e-33142
NC_014166:1179335:1187599118759911888821284Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM9e-33142
NC_007509:1043602:1047077104707710484291353Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctM subunit1e-32141
NC_016943:4194002:4234469423446942357641296Blastococcus saxobsidens DD2, complete genomeTRAP transporter subunit DctM3e-32140
NC_009767:433432:4531524531524544861335Roseiflexus castenholzii DSM 13941, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-32140
NC_014010:484000:5067365067365080491314Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTRAP dicarboxylate transporter- DctM subunit3e-31137
NC_007963:317291:3189413189413202631323Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-30134
NC_004463:2344128:2345192234519223470841893Bradyrhizobium japonicum USDA 110, complete genomeprobable ABC transporter permease protein2e-30134
NC_011894:3161289:3176689317668931785871899Methylobacterium nodulans ORS 2060, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit3e-30134
NC_017249:7917586:7935099793509979368981800Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-30134
NC_015578:3442866:3460190346019034620761887Treponema primitia ZAS-2 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM2e-29131
NC_008344:669498:6910706910706923531284Nitrosomonas eutropha C91, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-28129
NC_018691:198909:2205252205252218321308Alcanivorax dieselolei B5 chromosome, complete genomePutative membrane protein (TrapT family, dctM subunit transport)8e-29129
NC_014532:2268078:2270444227044422717511308Halomonas elongata DSM 2581, complete genomeTRAP transporter large transmembrane protein2e-28128
NC_003911:3864852:3864852386485238661651314Silicibacter pomeroyi DSS-3, complete genomeTRAP dicarboxylate family transporter, DctM subunit3e-28127
NC_009832:110239:1300111300111318821872Serratia proteamaculans 568, complete genomeTRAP dicarboxylate transporter, DctM subunit6e-28126
NC_009952:592000:5978205978205991061287Dinoroseobacter shibae DFL 12, complete genomeTRAP dicarboxylate transporter8e-28125
NC_010552:2454776:2471838247183824737481911Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceTRAP dicarboxylate transporter, DctM subunit8e-27122
NC_016943:4194002:4199365419936542006571293Blastococcus saxobsidens DD2, complete genomeTRAP dicarboxylate transporter-DctM subunit3e-26120
NC_017082:3717939:3719614371961437215091896Bradyrhizobium sp. S23321, complete genomeputative TRAP-type C4-dicarboxylate transport system2e-26120
NC_015259:485015:5600805600805620982019Polymorphum gilvum SL003B-26A1 chromosome, complete genomehypothetical protein4e-25117
NC_008820:2512518:2514204251420425155741371Prochlorococcus marinus str. MIT 9303, complete genomepossible Tripartite transporter component (TRAP-T family)4e-25116
NC_005296:2860000:2882000288200028833581359Rhodopseudomonas palustris CGA009, complete genomeTrapT family, dctM subunit, C4-dicarboxylate transport8e-25115
NC_013855:558831:5716875716875735791893Azospirillum sp. B510 plasmid pAB510a, complete sequenceTRAP C4-dicarboxylate transport system permease DctM subunit9e-25115
NC_007484:755058:7681097681097694371329Nitrosococcus oceani ATCC 19707, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-24115
NC_010506:4404377:4415275441527544166391365Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-24114
NC_014323:4355266:4370785437078543726681884Herbaspirillum seropedicae SmR1 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system dctQ-M fusion permease large permease5e-24113
NC_018581:759932:7741617741617756781518Gordonia sp. KTR9 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system, large permease component4e-24113
NC_008043:86470:1030161030161045211506Silicibacter sp. TM1040 mega plasmid, complete sequenceTRAP C4-dicarboxylate transport system permease DctM subunit4e-24113
NC_015684:3157941:3176197317619731775041308Oligotropha carboxidovorans OM5 chromosome, complete genomeTRAP transport system, large permease7e-24112
NC_011386:931140:9469529469529482591308Oligotropha carboxidovorans OM5, complete genometrap-type c4-dicarboxylate transport system7e-24112
NC_013166:194614:1974661974661988541389Kangiella koreensis DSM 16069, complete genomeTRAP dicarboxylate transporter, DctM subunit7e-24112
NC_015276:1426000:1426551142655114278851335Marinomonas mediterranea MMB-1 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-23111
NC_015573:813000:8418708418708431561287Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM3e-23110
NC_006569:370846:3742383742383755031266Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceTRAP dicarboxylate transporter, DctM subunit6e-23109
NC_014011:472650:4915424915424928431302Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit7e-23109
NC_002927:506183:5492685492685505391272Bordetella bronchiseptica RB50, complete genomeintegral membrane protein1e-22108
NC_015859:1069116:1079432107943210807181287Corynebacterium variabile DSM 44702 chromosome, complete genomeTRAP dicarboxylate transporter subunit1e-22108
NC_007802:2026500:2042505204250520438121308Jannaschia sp. CCS1, complete genomeTRAP dicarboxylate transporter- DctM subunit9e-23108
NC_008596:3404832:3425722342572234270831362Mycobacterium smegmatis str. MC2 155, complete genomeTRAP transporter, DctM-like membrane protein2e-22107
NC_017223:51180:6558265582667751194Bordetella pertussis CS chromosome, complete genomeintegral membrane protein4e-22106
NC_002929:52500:6558265582667751194Bordetella pertussis Tohama I, complete genomeintegral membrane protein4e-22106
NC_008254:3143770:3153601315360131548631263Mesorhizobium sp. BNC1, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit5e-22106
NC_018643:1309804:1334962133496213363231362Alpha proteobacterium HIMB5 chromosome, complete genomeDctM family transporter1e-21105
NC_007963:2777066:2790670279067027919861317Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit1e-21105
NC_020302:3014483:3031541303154130328511311Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein2e-20101
NC_016745:546249:5573915573915586801290Oceanimonas sp. GK1 chromosome, complete genomeTRAP C4-dicarboxylate transport system permease DctM4e-20100
NC_009342:2528426:2540410254041025417261317Corynebacterium glutamicum R chromosome, complete genomehypothetical protein7e-2099.4
NC_015259:624979:6249796249796263971419Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit2e-1998.2
NC_007948:5026122:5027642502764250289641323Polaromonas sp. JS666, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-1998.2
NC_009434:281474:2990762990763004521377Pseudomonas stutzeri A1501, complete genomeC4 dicarboxylate transporter permease3e-1997.1
NC_007802:3575739:3575739357573935771841446Jannaschia sp. CCS1, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit5e-1996.7
NC_015497:2859724:2875982287598228772621281Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-1894.7
NC_009663:851143:8511438511438530141872Sulfurovum sp. NBC37-1, complete genomeC4-dicarboxylate transporter, permease2e-1894.4
NC_007645:3688000:3689930368993036912521323Hahella chejuensis KCTC 2396, complete genomeTRAP-type mannitol/chloroaromatic compound transport system, large permease component4e-1893.6
NC_016002:2534516:2554000255400025555081509Pseudogulbenkiania sp. NH8B, complete genomeTRAP dicarboxylate transporter subunit DctM6e-1686.3
NC_014624:2668157:271831627183162718933618Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-1482
NC_020911:3046916:306132430613243061809486Octadecabacter antarcticus 307, complete genomeTRAP transporter small permease subunit DctQ3e-1170.9
NC_015730:921735:922776922776923270495Roseobacter litoralis Och 149 chromosome, complete genomeputative TRAP transporter subunit DctQ4e-0860.5
NC_013947:1696671:1713733171373317150701338Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit4e-0653.5