Pre_GI: BLASTN Hits

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Query: NC_008543:61000 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 61000, End: 80619, Length: 19620

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008061:21930002193000221082217823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence021280BLASTN svgBLASTP svg
NC_010515:14286641428664144787219209Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence04532BLASTN svgBLASTP svg
NC_010515:12052581205258122726722010Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence03366BLASTN svgBLASTP svg
NC_010515:13750911375091141715142061Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence02880BLASTN svgBLASTP svg
NC_010508:981377*981377100519623820Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence02863BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence02845BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence0650BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence4e-165589BLASTN svgBLASTP svg
NC_007651:36564333656433367931922887Burkholderia thailandensis E264 chromosome I, complete sequence4e-165589BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome9e-154551BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome3e-147529BLASTN svgBLASTP svg
NC_015458:2998000*2998000302249324494Pusillimonas sp. T7-7 chromosome, complete genome6e-121442BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome6e-121442BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete4e-91343BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome5e-63250BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome7e-59236BLASTN svgBLASTP svg
NC_008392:66600066600068894522946Burkholderia cepacia AMMD chromosome 3, complete sequence6e-50206BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome1e-48202BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-44186BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-44186BLASTN svgBLASTP svg
NC_010557:20784620784622851620671Burkholderia ambifaria MC40-6 chromosome 3, complete sequence1e-41178BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome1e-41178BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome9e-40172BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome8e-31143BLASTN svgBLASTP svg
NC_015556:45433804543380456955726178Pseudomonas fulva 12-X chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_015588:20377262037726205909921374Isoptericola variabilis 225 chromosome, complete genome7e-25123BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-24121BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-24121BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome1e-23119BLASTN svgBLASTP svg
NC_009078:27187412718741276343044690Burkholderia pseudomallei 1106a chromosome II, complete sequence7e-22113BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome7e-22113BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome1e-20109BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-20109BLASTN svgBLASTP svg
NC_007435:14469161446916149170044785Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-19105BLASTN svgBLASTP svg
NC_014500:4257145*4257145428370126557Dickeya dadantii 3937 chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_006350:1938631*1938631199668958059Burkholderia pseudomallei K96243 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_008463:2467219*2467219250339236174Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013716:357928*35792840652048593Citrobacter rodentium ICC168, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012721:1052883*1052883107472021838Burkholderia glumae BGR1 chromosome 2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007778:5079500*5079500510170222203Rhodopseudomonas palustris HaA2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014119:10592231059223108645627234Burkholderia sp. CCGE1002 chromosome chromosome 3, complete2e-1075.8BLASTN svgBLASTP svg
NC_008062:813388133810014818811Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_008544:55451554517864523195Burkholderia cenocepacia HI2424 chromosome 3, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0971.9BLASTN svgBLASTP svg
NC_014318:2252417*2252417228159929183Amycolatopsis mediterranei U32 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010087:46059146059149073730147Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0971.9BLASTN svgBLASTP svg
NC_015377:868478684711271425868Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequence9e-0969.9BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009138:31535763153576318147527900Herminiimonas arsenicoxydans, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009921:53315655331565535374522181Frankia sp. EAN1pec, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008095:67595006759500678099421495Myxococcus xanthus DK 1622, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012660:5121219*5121219514562724409Pseudomonas fluorescens SBW25 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_008596:34048323404832344268737856Mycobacterium smegmatis str. MC2 155, complete genome9e-0660BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome9e-0660BLASTN svgBLASTP svg