Pre_GI: BLASTP Hits

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Query: NC_008148:1711679:1721695 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1721695, End: 1722588, Length: 894

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:4399000:440358844035884404478891Frankia sp. EAN1pec, complete genomepyruvate carboxyltransferase1e-70266
NC_013412:33834:145414542338885Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequencepyruvate carboxyltransferase1e-56219
NC_014916:22644:293372933730221885Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequencepyruvate carboxyltransferase1e-56219
NC_007626:697926:722387722387723280894Magnetospirillum magneticum AMB-1, complete genomeIsopropylmalate/homocitrate/citramalate synthase7e-55214
NC_016593:762216:788713788713789612900Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completepyruvate carboxyltransferase6e-52204
NC_020210:661236:670371670371671270900Geobacillus sp. GHH01, complete genomehydroxymethylglutaryl-CoA lyase1e-50200
NC_009727:1542000:154394015439401544839900Coxiella burnetii Dugway 7E9-12, complete genomehydroxymethylglutaryl-CoA lyase1e-50199
NC_011527:1443076:144307614430761443975900Coxiella burnetii CbuG_Q212, complete genomehydroxymethylglutaryl-CoA lyase1e-50199
NC_014318:1537732:155728815572881558223936Amycolatopsis mediterranei U32 chromosome, complete genomehydroxymethylglutaryl-CoA lyase3e-50198
NC_011528:1282691:128269112826911283590900Coxiella burnetii CbuK_Q154, complete genomehydroxymethylglutaryl-CoA lyase4e-50198
NC_014623:5181000:518327651832765184253978Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepyruvate carboxyltransferase6e-50197
NC_013791:2273389:228100322810032281917915Bacillus pseudofirmus OF4 chromosome, complete genomehydroxymethylglutaryl-CoA lyase7e-50197
NC_021171:1689518:169858416985841699501918Bacillus sp. 1NLA3E, complete genomehydroxymethylglutaryl-CoA lyase6e-49194
NC_014098:1258559:127455112745511275459909Bacillus tusciae DSM 2912 chromosome, complete genomepyruvate carboxyltransferase5e-47188
NC_011961:528837:538904538904539809906Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehydroxymethylglutaryl-CoA lyase, (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase)9e-45180
NC_002570:1220180:123086212308621231773912Bacillus halodurans C-125, complete genomehydroxymethylglutaryl-CoA lyase1e-44180
NC_002928:507749:540705540705541652948Bordetella parapertussis 12822, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-44179
NC_008700:1627401:164666716466671647557891Shewanella amazonensis SB2B, complete genomepyruvate carboxyltransferase2e-44179
NC_010175:448020:470049470049470990942Chloroflexus aurantiacus J-10-fl, complete genomepyruvate carboxyltransferase4e-44178
NC_012032:448161:470191470191471132942Chloroflexus sp. Y-400-fl, complete genomepyruvate carboxyltransferase4e-44178
NC_013446:3520500:353669135366913537584894Comamonas testosteroni CNB-2, complete genomepyruvate carboxyltransferase3e-44178
NC_010511:1351000:135147713514771352394918Methylobacterium sp. 4-46 chromosome, complete genomepyruvate carboxyltransferase1e-42174
NC_013316:891782:895342895342896238897Clostridium difficile R20291, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-42173
NC_013315:895500:897727897727898623897Clostridium difficile CD196 chromosome, complete genomehydroxymethylglutaryl-CoA lyase1e-42173
NC_017179:905347:907504907504908400897Clostridium difficile BI1, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-42173
NC_005296:2860000:288100028810002881905906Rhodopseudomonas palustris CGA009, complete genome3-hydroxy-3-methylglutaryl-CoA lyase1e-42173
NC_009089:965959:968115968115969011897Clostridium difficile 630, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-42173
NC_015723:589727:591846591846592799954Cupriavidus necator N-1 chromosome 2, complete sequencehydroxymethylglutaryl-CoA lyase YngG8e-42171
NC_015381:4182194:419556941955694196555987Burkholderia gladioli BSR3 chromosome 1, complete sequencepyruvate carboxyltransferase1e-41170
NC_008260:2992813:3012622301262230136741053Alcanivorax borkumensis SK2, complete genomehydroxymethylglutaryl-CoA lyase3e-40165
NC_009512:5632591:565196556519655652900936Pseudomonas putida F1, complete genomepyruvate carboxyltransferase4e-40165
NC_016906:3666358:366862836686283669533906Gordonia polyisoprenivorans VH2 chromosome, complete genomehydroxymethylglutaryl-CoA lyase YngG1e-38160
NC_007802:1093785:111099111109911111845855Jannaschia sp. CCS1, complete genomeHydroxymethylglutaryl-CoA lyase2e-37156
NC_016148:1877711:191195819119581912878921Thermovirga lienii DSM 17291 chromosome, complete genomepyruvate carboxyltransferase4e-37155
NC_012982:1569426:158914515891451590107963Hirschia baltica ATCC 49814, complete genomepyruvate carboxyltransferase3e-36152
NC_013508:2130681:214523821452382146176939Edwardsiella tarda EIB202, complete genomeputative hydroxymethylglutaryl-CoA lyase2e-34146
NC_015458:2338437:233750223375022338440939Pusillimonas sp. T7-7 chromosome, complete genomehydroxymethylglutaryl-CoA lyase3e-31135
NC_020302:146807:164963164963165919957Corynebacterium halotolerans YIM 70093 = DSM 44683, completehydroxymethylglutaryl-CoA lyase3e-28125
NC_014221:3175013:319765031976503198549900Truepera radiovictrix DSM 17093 chromosome, complete genomeHydroxymethylglutaryl-CoA lyase2e-20100
NC_014655:3345204:335046833504683351310843Leadbetterella byssophila DSM 17132 chromosome, complete genomehydroxymethylglutaryl-CoA lyase4e-2098.6
NC_013132:3605317:360783636078363608681846Chitinophaga pinensis DSM 2588, complete genomeHydroxymethylglutaryl-CoA lyase5e-2098.6
NC_014738:1507641:150908415090841509932849Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hydroxymethylglutaryl-CoA lyase2e-1892.8
NC_020125:194691:218941218941219759819Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein4e-1685.5
NC_015727:1050500:105631110563111056805495Cupriavidus necator N-1 plasmid BB1p, complete sequence1e-1377.4