Pre_GI: BLASTP Hits

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Query: NC_006905:2355290:2359241 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2359241, End: 2359501, Length: 261

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1517925:153511315351131535535423Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence protein MsgA-like protein3e-34143
NC_011083:2375061:239242023924202392797378Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative homolog of virulence protein MsgA4e-34143
NC_016860:2323017:234038323403832340760378Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-34143
NC_011205:2462025:246598124659812466358378Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853virulence protein MsgA4e-34143
NC_017046:2324554:234187823418782342297420Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein msgA3e-34143
NC_016832:687000:702498702498702758261Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Virulence protein MsgA-like protein3e-34143
NC_016857:2325190:234261623426162342933318Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein4e-34142
NC_016856:2379027:239645323964532396770318Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein4e-34142
NC_003198:2297837:230196623019662302169204Salmonella enterica subsp. enterica serovar Typhi str. CT18,homolog of virulence protein msgA2e-22103
NC_003197:2327474:234501423450142345217204Salmonella typhimurium LT2, complete genomevirulence protein2e-22103
NC_004631:685357:702544702544702747204Salmonella enterica subsp. enterica serovar Typhi Ty2, completehomolog of virulence protein msgA2e-22103
NC_016810:2325190:234273023427302342933204Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein MsgA2e-22103
NC_016863:2324293:234475923447592344962204Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein2e-22103
NC_016831:687549:704194704194704430237Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-21102
NC_011080:2342672:234676823467682346989222Salmonella enterica subsp. enterica serovar Newport str. SL254,putative homolog of virulence protein MsgA1e-21101
NC_011094:2348491:235070223507022350905204Salmonella enterica subsp. enterica serovar Schwarzengrund strMsgA-like virulence protein2e-2097.4
NC_011274:2325840:232996923299692330172204Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-2096.3
NC_011294:2334979:233910923391092339312204Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-2096.3
NC_010102:683444:700606700606700794189Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-2095.9
NC_011147:682897:699991699991700194204Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence protein MsgA-like protein2e-1787.4
NC_006511:682863:700052700052700255204Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChomolog of virulence protein msgA2e-1787.4
NC_011149:2294500:229646322964632296618156Salmonella enterica subsp. enterica serovar Agona str. SL483,virulence protein MsgA homolog9e-1062.4