Pre_GI: BLASTP Hits

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Query: NC_006511:2819128:2852505 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2852505, End: 2852912, Length: 408

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2814664:284804128480412848448408Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence-associated secretory protein2e-65247
NC_003198:2856596:288996928899692890376408Salmonella enterica subsp. enterica serovar Typhi str. CT18,secretory protein (associated with virulence)1e-64244
NC_003197:3005842:303796930379693038376408Salmonella typhimurium LT2, complete genomesecretion chaperone1e-64244
NC_011080:2982346:301447330144733014880408Salmonella enterica subsp. enterica serovar Newport str. SL254,surface presentation of antigens protein SpaK1e-64244
NC_004631:2872192:287582628758262876233408Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence-associated secretory protein1e-64244
NC_011149:2912219:294649529464952946902408Salmonella enterica subsp. enterica serovar Agona str. SL483,surface presentation of antigens protein SpaK1e-64244
NC_011083:3009760:301248330124833012890408Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,surface presentation of antigens protein SpaK1e-64244
NC_011094:2913500:294516529451652945572408Salmonella enterica subsp. enterica serovar Schwarzengrund strsurface presentation of antigens protein SpaK1e-64244
NC_011205:3078732:308236630823663082773408Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853surface presentation of antigens protein SpaK1e-64244
NC_011294:2919906:292262929226292923036408Salmonella enterica subsp. enterica serovar Enteritidis strsecretory protein1e-64244
NC_016863:2974333:300645930064593006866408Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion chaperone1e-64244
NC_016860:3029272:306139930613993061806408Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein SpaK1e-64244
NC_016857:3028421:306054530605453060952408Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Surface presentation of antigens protein spaK1e-64244
NC_016856:3026426:305820630582063058613408Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion chaperone1e-64244
NC_016832:2859491:286312528631252863532408Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaK1e-64244
NC_016831:2867766:289989328998932900300408Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)1e-64244
NC_016810:3028421:306054530605453060952408Salmonella enterica subsp. enterica serovar Typhimurium strchaperone protein for type III secretion system effectors1e-64244
NC_012125:2938519:297188029718802972287408Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence-associated secretory protein4e-64242
NC_006905:2987863:299149729914972991904408Salmonella enterica subsp. enterica serovar Choleraesuis strsurface presentation of antigens; secretory proteins4e-64242
NC_011274:2909799:291343329134332913840408Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence associated secretory protein9e-64241
NC_010102:2967464:300095130009513001187237Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-30129
NC_017046:3027161:305928530592853059506222Salmonella enterica subsp. enterica serovar Typhimurium str. 798chaperone protein for type III secretion system effectors5e-28122