Pre_GI: BLASTP Hits

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Query: NC_004603:2235142:2237624 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 2237624, End: 2237851, Length: 228

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014965:2200974:220206022020602202287228Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein2e-30130
NC_014618:1593360:160718116071811607408228Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein4e-1580.1
NC_015566:3622385:362586236258623626089228Serratia sp. AS12 chromosome, complete genomehypothetical protein8e-1579
NC_010067:660659:678272678272678499228Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1477.4
NC_020064:3157656:316212431621243162351228Serratia marcescens FGI94, complete genomehypothetical protein3e-1477
NC_013961:2370994:237536123753612375588228Erwinia amylovora, complete genomeUPF0352 protein YPO1261/y2923/YP_08809e-1475.5
NC_013971:2408522:241288924128892413116228Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein9e-1475.5
NC_012917:1840172:188157018815701881800231Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-1375.1
NC_016816:1545354:157494915749491575173225Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-1374.3
NC_012912:2800884:280205728020572802287231Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF14144e-1270.1
NC_011663:2123388:214232221423222142579258Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-1168.9
NC_008322:2716676:271774327177432718000258Shewanella sp. MR-7, complete genomeprotein of unknown function DUF14144e-1166.6
NC_008321:2649781:264978126497812650038258Shewanella sp. MR-4, complete genomeprotein of unknown function DUF14144e-1166.6
NC_011147:682897:702178702178702405228Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-1166.2
NC_011094:2348491:234849123484912348718228Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-1166.2
NC_003197:2327474:232866123286612328888228Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein6e-1166.2
NC_006511:682863:702232702232702459228Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-1166.2
NC_010102:683444:716921716921717148228Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1166.2
NC_004631:685357:709439709439709666228Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-1166.2
NC_011083:2375061:237624823762482376475228Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein6e-1166.2
NC_012125:1517925:154181415418141542041228Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-1166.2
NC_016810:2325190:232637723263772326604228Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-1166.2
NC_017046:2324554:232574123257412325968228Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-1166.2
NC_016863:2324293:232840623284062328633228Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-1166.2
NC_016860:2323017:232420423242042324431228Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-1166.2
NC_016857:2325190:232637723263772326604228Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74protein yejL6e-1166.2
NC_016856:2379027:238021423802142380441228Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-1166.2
NC_016832:687000:709393709393709620228Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-1166.2
NC_016831:687549:711330711330711557228Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-1166.2
NC_009092:1684467:169729216972921697570279Shewanella loihica PV-4, complete genomeprotein of unknown function DUF14143e-1063.9
NC_011852:211314:233054233054233278225Haemophilus parasuis SH0165, complete genomehypothetical protein4e-0960.1