Pre_GI: BLASTP Hits

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Query: NC_004547:1062410:1080117 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1080117, End: 1081325, Length: 1209

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008593:1859861:1879710187971018809211212Clostridium novyi NT, complete genomeHypothetical UPF0261 protein2e-79296
NC_014328:2518081:2522853252285325240611209Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-78293
NC_013406:5954472:5955352595535259565631212Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein1e-77290
NC_014298:310964:3280773280773293031227Halalkalicoccus jeotgali B3 plasmid 1, complete sequencehypothetical protein3e-77289
NC_019974:3013338:3041141304114130423491209Natronococcus occultus SP4, complete genomehypothetical protein7e-77288
NC_009699:1698951:1708456170845617096641209Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein3e-76285
NC_017297:1700000:1708587170858717097951209Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein3e-76285
NC_012658:1658505:1667646166764616688541209Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein2e-75283
NC_017955:2327500:2344452234445223457381287Modestobacter marinus, complete genomehypothetical protein4e-42172
NC_007517:2342607:2369593236959323708491257Geobacter metallireducens GS-15, complete genomehypothetical protein6e-41168
NC_012883:1462000:1478525147852514799551431Thermococcus sibiricus MM 739, complete genomehypothetical protein8e-40164
NC_006085:925604:949031949031949723693Propionibacterium acnes KPA171202, complete genomeconserved protein, putative Y4OU fragment5e-27122
NC_006085:925604:948738948738948926189Propionibacterium acnes KPA171202, complete genomeconserved protein, putative Y4OU fragment1e-0655.1