Pre_GI: BLASTP Hits

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Query: NC_004337:2098736:2110130 Shigella flexneri 2a str. 301, complete genome

Start: 2110130, End: 2110519, Length: 390

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:2153083:216443121644312164820390Shigella flexneri 2002017 chromosome, complete genomeProtein rfbJ5e-72269
NC_004741:2081649:209299720929972093386390Shigella flexneri 2a str. 2457T, complete genomeglycosyl transferase5e-72269
NC_014306:3210311:322185032218503222800951Erwinia billingiae Eb661, complete genomeGlycosyl transferase, family 29e-46181
NC_017047:1862893:187108218710821872071990Rahnella aquatilis HX2 chromosome, complete genomefamily 2 glycosyl transferase1e-41167
NC_021150:1564229:158116015811601582128969Azotobacter vinelandii CA6, complete genomeGlycosyl transferase, family 26e-38155
NC_012560:1564500:158114715811471582115969Azotobacter vinelandii DJ, complete genomeGlycosyl transferase, family 26e-38155
NC_019902:27574:330793307934023945Thioalkalivibrio nitratireducens DSM 14787, complete genomeRfbJ protein2e-37154
NC_015942:3147514:3166834316683431678531020Acidithiobacillus ferrivorans SS3 chromosome, complete genomefamily 2 glycosyl transferase1e-35148
NC_014539:860402:871231871231872184954Burkholderia sp. CCGE1003 chromosome 1, complete sequencefamily 2 glycosyl transferase3e-35146
NC_014733:1857020:186533018653301866265936Methylovorus sp. MP688 chromosome, complete genomeglycosyl transferase family protein9e-35145
NC_014562:1844268:185475318547531855694942Pantoea vagans C9-1 chromosome, complete genomeDolichol-phosphate mannosyltransferase1e-34144
NC_013416:875758:884636884636885556921Aggregatibacter actinomycetemcomitans D11S-1, complete genomeglycosyl transferase, family 25e-34142
NC_010622:2576110:258180125818012582799999Burkholderia phymatum STM815 chromosome 1, complete sequenceglycosyl transferase family 28e-33139
NC_004307:1815825:183518118351811836137957Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase4e-32136
NC_017221:73864:818818188182825945Bifidobacterium longum subsp. longum KACC 91563 chromosome,wcaa35e-32136
NC_014169:2234249:223738822373882238365978Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 2 glycosyl transferase5e-32136
NC_014616:54500:622016220163151951Bifidobacterium bifidum S17 chromosome, complete genomefamily 2 glycosyl transferase3e-31133
NC_014656:1829336:1859442185944218607671326Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein4e-31133
NC_011593:2650156:265618526561852657126942Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 2 glycosyl transferase6e-31132
NC_017219:2646157:265218626521862653127942Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative glycosyltransferase6e-31132
NC_010610:1580483:159001715900171590964948Lactobacillus fermentum IFO 3956, complete genomeglycosyltransferase2e-29127
NC_014656:1829336:183654018365401837484945Bifidobacterium longum subsp. longum BBMN68 chromosome, completewcaa32e-28124
NC_004307:1815825:182458518245851825541957Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase5e-28122
NC_010816:1852406:186401918640191864963945Bifidobacterium longum DJO10A, complete genomeGlycosyltransferase for cell wall membrane5e-28122
NC_015052:2181514:220562722056272206568942Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase3e-27120
NC_017218:2119964:214990721499072150872966Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeglycosyltransferase, group 2 family protein3e-27120
NC_011835:733320:7413147413147423211008Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyltransferase2e-27120
NC_017214:299637:3076263076263086331008Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeglycosyltransferase2e-27120
NC_017215:1605917:1615020161502016160271008Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,dolichyl-phosphate beta-D-mannosyltransferase2e-27120
NC_017216:1603000:1610031161003116110381008Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase, family 22e-27120
NC_007950:185500:189604189604190560957Polaromonas sp. JS666 plasmid 2, complete sequenceglycosyl transferase, family 26e-22102
NC_010125:3467379:347253234725323473488957Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glycosyl transferase1e-21101
NC_017217:1607679:161567316156731616614942Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase8e-2199
NC_012814:1599241:161038616103861611327942Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase8e-2199
NC_012815:1603916:161010416101041611045942Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase8e-2199
NC_016070:1178462:1179773117977311808371065Thermoproteus tenax Kra 1, complete genomeglycosyltransferase3e-1684
NC_014253:2113233:211558521155852116511927Methanohalobium evestigatum Z-7303 chromosome, complete genomeglycosyl transferase family 21e-1478.6
NC_000961:372000:395021395021395935915Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1477.8
NC_019977:65205:794387943880358921Methanomethylovorans hollandica DSM 15978, complete genomeglycosyl transferase8e-1475.9
NC_015676:2099930:210364821036482104571924Methanosalsum zhilinae DSM 4017 chromosome, complete genomefamily 2 glycosyl transferase9e-1475.5
NC_013967:1375255:138140013814001382311912Haloferax volcanii DS2 chromosome, complete genomeglycosyltransferase AlgJ1e-1374.7
NC_018876:1489895:149301814930181493956939Methanolobus psychrophilus R15 chromosome, complete genomeglycosyl transferase family protein6e-1372.8
NC_014002:1772060:178833017883301789247918Methanohalophilus mahii DSM 5219 chromosome, complete genomeglycosyl transferase family 21e-1272
NC_011071:3544450:354994635499463550845900Stenotrophomonas maltophilia R551-3, complete genomeglycosyl transferase family 21e-1271.6
NC_014924:725380:743704743704744570867Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeglycosyl transferase family 22e-1271.2
NC_014962:4538122:4549737454973745510051269Isosphaera pallida ATCC 43644 chromosome, complete genomefamily 2 glycosyl transferase6e-1269.7
NC_009012:3653111:365565136556513656349699Clostridium thermocellum ATCC 27405, complete genomeglycosyl transferase, family 25e-1269.7
NC_015216:1278706:1320243132024313213731131Methanobacterium sp. AL-21 chromosome, complete genomefamily 2 glycosyl transferase1e-1168.6
NC_007955:1566189:157144715714471572373927Methanococcoides burtonii DSM 6242, complete genomeglycosyl transferase, family 22e-1168.2
NC_009464:1479174:150717015071701508078909Uncultured methanogenic archaeon RC-I, complete genomeglycosyltransferase (family 2)3e-1167.4
NC_014973:2894248:2913836291383629148491014Geobacter sp. M18 chromosome, complete genomefamily 2 glycosyl transferase8e-1165.9
NC_016935:634500:664043664043664750708Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 2 glycosyl transferase7e-1165.9
NC_014408:682689:691429691429692106678Methanothermobacter marburgensis str. Marburg chromosome, completeglycosyltransferase9e-1165.5
NC_015416:1039144:104347310434731044396924Methanosaeta concilii GP-6 chromosome, complete genomeglycosyl transferase, group 2 family protein9e-1165.5
NC_000916:251000:266738266738267403666Methanothermobacter thermautotrophicus str. Delta H, completemannosyltransferase2e-1064.7
NC_009073:455381:4586454586454597601116Pyrobaculum calidifontis JCM 11548, complete genomeglycosyl transferase, family 24e-1063.5
NC_000917:40111:4115341153422621110Archaeoglobus fulgidus DSM 4304, complete genomedolichol-P-glucose synthetase, putative4e-1063.5
NC_014205:842314:846306846306847232927Staphylothermus hellenicus DSM 12710 chromosome, complete genomeglycosyl transferase family 24e-1063.5
NC_014507:1403000:1407340140734014084971158Methanoplanus petrolearius DSM 11571 chromosome, complete genomeglycosyl transferase family 2 protein5e-1063.2
NC_012883:1:490649065778873Thermococcus sibiricus MM 739, complete genomeGlycosyl transferase6e-1062.8
NC_003552:2674385:267583826758382676806969Methanosarcina acetivorans C2A, complete genomedolichyl-phosphate beta-D-mannosyltransferase6e-1062.8
NC_015948:1131628:1152922115292211539921071Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeglycosyltransferase-like protein6e-1062.8
NC_007426:2248000:227410722741072275051945Natronomonas pharaonis DSM 2160, complete genomeglycosyltransferase 1 (probable dolichyl-phosphate beta-D-mannosyltransferase )7e-1062.8
NC_019962:960831:9639119639119649181008Natrinema pellirubrum DSM 15624, complete genomeglycosyl transferase8e-1062.4
NC_020541:1014176:101887210188721019726855Rhodanobacter sp. 2APBS1, complete genomeglycosyl transferase1e-0962
NC_009464:2523092:255409125540912555041951Uncultured methanogenic archaeon RC-I, complete genomeglucosyltransferase (family 2)1e-0962
NC_002607:795777:799383799383800300918Halobacterium sp. NRC-1, complete genomeGtl1e-0961.6
NC_010364:787766:791372791372792289918Halobacterium salinarum R1, complete genomeputative glycosyltransferase, type 21e-0961.6
NC_014972:2371647:238785223878522388718867Desulfobulbus propionicus DSM 2032 chromosome, complete genomefamily 2 glycosyl transferase1e-0961.6
NC_013665:1922000:193154619315461932523978Methanocella paludicola SANAE, complete genomeputative glycosyltransferase2e-0961.6
NC_011901:837085:855482855482856357876Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completefamily 2 glycosyl transferase2e-0961.6
NC_006396:878453:898429898429899403975Haloarcula marismortui ATCC 43049 chromosome I, complete sequencedolichyl-phosphate beta-D-mannosyltransferase2e-0961.6
NC_013158:1027015:1033599103359910349451347Halorhabdus utahensis DSM 12940, complete genomeglycosyl transferase family 22e-0961.2
NC_019902:27574:356763567636566891Thioalkalivibrio nitratireducens DSM 14787, complete genomeGlycosyltransferase involved in cell wall biogenesis2e-0961.2
NC_011886:2696671:270750927075092708240732Arthrobacter chlorophenolicus A6, complete genomeglycosyl transferase family 23e-0960.5
NC_003901:1386000:140501214050121405986975Methanosarcina mazei Go1, complete genomedolichyl-phosphate mannose synthase-like protein4e-0960.1
NC_014160:539347:559098559098560072975Thermosphaera aggregans DSM 11486 chromosome, complete genomefamily 2 glycosyltransferase4e-0960.1
NC_011979:1590432:162210616221061622819714Geobacter sp. FRC-32, complete genomeglycosyl transferase family 26e-0959.3
NC_010525:421769:4446444446444457321089Thermoproteus neutrophilus V24Sta, complete genomeglycosyl transferase family 28e-0958.9
NC_014002:80967:102337102337103275939Methanohalophilus mahii DSM 5219 chromosome, complete genomeglycosyl transferase family 29e-0958.9
NC_003901:1947491:195340219534021954322921Methanosarcina mazei Go1, complete genomeglycosyltransferase1e-0858.5
NC_015680:1562535:159907815990781599953876Pyrococcus yayanosii CH1 chromosome, complete genomeglycosyl transferase, group 2 family protein2e-0858.2
NC_016051:1803880:1836247183624718373561110Thermococcus sp. AM4 chromosome, complete genomedolichol-p-glucose synthetase2e-0858.2
NC_018012:121793:144072144072144974903Thiocystis violascens DSM 198 chromosome, complete genomeglycosyl transferase family protein2e-0858.2
NC_014729:1627620:163722316372231637918696Halogeometricum borinquense DSM 11551 chromosome, complete genomeglycosyl transferase2e-0857.8
NC_018876:2305659:233316223331622334061900Methanolobus psychrophilus R15 chromosome, complete genomeglycosyl transferase family protein2e-0857.8
NC_009480:2580429:261344926134492614183735Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative glycosyl transferase2e-0857.4
NC_014537:453644:465813465813466775963Vulcanisaeta distributa DSM 14429 chromosome, complete genomeglycosyl transferase family 2 protein3e-0857.4
NC_019977:1456366:147397914739791474875897Methanomethylovorans hollandica DSM 15978, complete genomeglycosyl transferase3e-0857.4
NC_014152:1430156:143195514319551432584630Thermincola sp. JR, complete genomeglycosyl transferase family 24e-0857
NC_003551:812939:830924830924831646723Methanopyrus kandleri AV19, complete genomeGlycosyltransferase involved in cell wall biogenesis4e-0857
NC_020389:1683120:168990716899071690821915Methanosarcina mazei Tuc01, complete genomeDolichol-phosphate mannosyltransferase4e-0857
NC_012918:1921891:192592619259261926609684Geobacter sp. M21 chromosome, complete genomefamily 2 glycosyl transferase3e-0857
NC_014973:2945942:296173729617372962420684Geobacter sp. M18 chromosome, complete genomefamily 2 glycosyl transferase5e-0856.6
NC_008726:4725389:4749076474907647503891314Mycobacterium vanbaalenii PYR-1, complete genomeglycosyl transferase, family 25e-0856.6
NC_020304:2237194:2258547225854722597401194Desulfocapsa sulfexigens DSM 10523, complete genomeglycosyl transferase8e-0855.8
NC_016609:6361862:6363875636387563652511377Niastella koreensis GR20-10 chromosome, complete genomefamily 2 glycosyl transferase7e-0855.8
NC_003552:1397311:1413428141342814145731146Methanosarcina acetivorans C2A, complete genomedolichyl-phosphate beta-D-mannosyltransferase1e-0755.5
NC_002939:1926084:195263719526371953356720Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 2 family protein2e-0755.1
NC_011831:2410607:241400524140052414697693Chloroflexus aggregans DSM 9485, complete genomeglycosyl transferase family 21e-0755.1
NC_012032:1827244:182893818289381829630693Chloroflexus sp. Y-400-fl, complete genomeglycosyl transferase family 21e-0755.1
NC_011529:1685834:1699714169971417008321119Thermococcus onnurineus NA1, complete genomedolichol-phosphate mannosyltransferase1e-0755.1
NC_000868:1130944:114998811499881150689702Pyrococcus abyssi GE5, complete genomeglycosyltransferase1e-0755.1
NC_010175:1825878:182757218275721828282711Chloroflexus aurantiacus J-10-fl, complete genomeglycosyl transferase family 21e-0755.1
NC_014315:2711852:272172827217282722597870Nitrosococcus watsoni C-113 chromosome, complete genomeglycosyl transferase family 22e-0754.7
NC_015675:2697131:2709071270907127100961026Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 2 glycosyl transferase2e-0754.3
NC_019964:2680935:270195227019522702848897Halovivax ruber XH-70, complete genomeglycosyl transferase2e-0754.3
NC_015955:616839:6195036195036208881386Halophilic archaeon DL31 plasmid phalar01, complete sequencefamily 2 glycosyl transferase2e-0754.3
NC_007759:2315490:231630223163022317228927Syntrophus aciditrophicus SB, complete genomeglycosyltransferase involved in cell wall biogenesis2e-0754.3
NC_020389:2245368:2267387226738722685291143Methanosarcina mazei Tuc01, complete genomedolichyl-phosphate beta-D-mannosyltransferase3e-0753.9
NC_018876:516220:517666517666518556891Methanolobus psychrophilus R15 chromosome, complete genomeglycosyl transferase family protein3e-0753.9
NC_007513:75197:829458294583631687Synechococcus sp. CC9902, complete genomeglycosyltransferase4e-0753.5
NC_014828:2605798:260579826057982606778981Ethanoligenens harbinense YUAN-3 chromosome, complete genomeglycosyl transferase family 24e-0753.5
NC_003888:4927170:4971401497140149736322232Streptomyces coelicolor A3(2), complete genomebi-functional transferase/deacetylase4e-0753.5
NC_015556:4074367:408836540883654089216852Pseudomonas fulva 12-X chromosome, complete genomeglycosyl transferase family 24e-0753.5
NC_013769:914000:929123929123930019897Sulfolobus islandicus L.D.8.5 chromosome, complete genomefamily 2 glycosyl transferase4e-0753.5
NC_009664:1195630:121077712107771211556780Kineococcus radiotolerans SRS30216, complete genomeglycosyl transferase family 24e-0753.1
NC_013665:2495234:250829225082922509173882Methanocella paludicola SANAE, complete genomeputative glycosyltransferase5e-0753.1
NC_011529:1722829:174262217426221743512891Thermococcus onnurineus NA1, complete genomeGlycosyl transferase6e-0753.1
NC_019973:5069499:5086618508661850876491032Mesorhizobium australicum WSM2073, complete genomeglycosyl transferase7e-0752.8
NC_009051:165102:1942251942251953611137Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, family 28e-0752.4
NC_017079:732834:750902750902751900999Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative glycosyltransferase9e-0752.4
NC_019940:1:1499414994160281035Thioflavicoccus mobilis 8321 chromosome, complete genomeglycosyl transferase family protein1e-0652
NC_012925:1125876:112766311276631128379717Streptococcus suis P1/7, complete genomeglycosyl transferase1e-0652
NC_009442:1216355:121635512163551217071717Streptococcus suis 05ZYH33 chromosome, complete genomecell wall biosynthesis glycosyltransferase1e-0652
NC_013202:59278:8475984759861111353Halomicrobium mukohataei DSM 12286, complete genomeglycosyl transferase family 21e-0652
NC_013729:666406:681990681990682721732Kribbella flavida DSM 17836, complete genomeglycosyl transferase family 22e-0651.6
NC_013790:2865843:2867635286763528693441710Methanobrevibacter ruminantium M1 chromosome, complete genomecell wall biosynthesis glycosyl transferase2e-0651.6
NC_019673:2635585:2654244265424426554911248Saccharothrix espanaensis DSM 44229 complete genomeGlycosyltransferase, family 21e-0651.6
NC_003901:1386000:140621314062131407181969Methanosarcina mazei Go1, complete genomedolichyl-phosphate mannose synthase-like protein1e-0651.6
NC_016109:3525588:356774735677473568433687Kitasatospora setae KM-6054, complete genomeputative glycosyltransferase2e-0651.2
NC_010617:988758:991962991962992627666Kocuria rhizophila DC2201, complete genomeputative glycosyltransferase2e-0651.2
NC_003364:225500:2392962392962404801185Pyrobaculum aerophilum str. IM2, complete genomeglycosyltransferase (type 2)3e-0650.8
NC_013235:4618908:4623543462354346247031161Nakamurella multipartita DSM 44233, complete genomeglycosyl transferase family 23e-0650.8
NC_008358:798390:815822815822816772951Hyphomonas neptunium ATCC 15444, complete genomeglycosyl transferase, group 2 family protein3e-0650.8
NC_020304:2677372:268625826862582687211954Desulfocapsa sulfexigens DSM 10523, complete genomeglycosyl transferase2e-0650.8
NC_009051:2365711:237922323792232380164942Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, family 23e-0650.4
NC_008554:156744:1582631582631594441182Syntrophobacter fumaroxidans MPOB, complete genomeglycosyl transferase, family 24e-0650.1
NC_003901:1346281:134910613491061350005900Methanosarcina mazei Go1, complete genomedolichyl-phosphate mannose synthase-like protein4e-0650.1
NC_003901:1346281:136314613631461364042897Methanosarcina mazei Go1, complete genomedolichol-phosphate mannosyltransferase4e-0650.1
NC_008553:1156285:116727211672721168168897Methanosaeta thermophila PT, complete genomeglycosyl transferase, family 24e-0650.1
NC_007777:4597379:461528546152854616100816Frankia sp. CcI3, complete genomeglycosyl transferase, family 25e-0649.7
NC_016513:1958500:196795519679551968659705Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative glycosylltransferase8e-0649.3
NC_015145:2693749:270634427063442707054711Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglycosyl transferase8e-0649.3