Pre_GI: BLASTP Hits

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Query: NC_004129:2034500:2046050 Pseudomonas fluorescens Pf-5, complete genome

Start: 2046050, End: 2047222, Length: 1173

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:5825925:583382458338245834417594Pseudomonas syringae pv. syringae B728a, complete genomeconserved hypothetical bacteriophage protein2e-42173
NC_009654:615504:6301926301926312861095Marinomonas sp. MWYL1, complete genomehypothetical protein6e-40165
NC_007005:5825925:583441858344185834795378Pseudomonas syringae pv. syringae B728a, complete genomeunnamed protein product; similar to bacteriophage protein8e-37154
NC_008027:5533311:554148355414835541782300Pseudomonas entomophila L48, complete genomehypothetical protein3e-36152
NC_008751:1736512:1747426174742617485051080Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeGp5 domain protein3e-36152
NC_006511:2677964:2699408269940827011081701Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene9e-29128
NC_012583:242760:2464762464762481071632Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-28126
NC_009456:998935:1012862101286210144931632Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-28126
NC_011883:303980:3061613061613072431083Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Gp5 domain protein3e-28126
NC_013892:992811:1014091101409110157371647Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-25115
NC_016602:2586044:259890925989092599520612Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein1e-1274.7