Pre_GI: BLASTP Hits

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Query: NC_003888:5790104:5811167 Streptomyces coelicolor A3(2), complete genome

Start: 5811167, End: 5812522, Length: 1356

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:3602753:3607061360706136084161356Streptomyces coelicolor A3(2), complete genomeplasmid transfer protein0683
NC_016114:3575955:3581348358134835827001353Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeDNA translocase FtsK8e-180630
NC_003888:6103534:6133491613349161357972307Streptomyces coelicolor A3(2), complete genometraSA:integrase fusion protein3e-177621
NC_013929:5248000:5262523526252352638991377Streptomyces scabiei 87.22 chromosome, complete genomeplasmid transfer protein9e-118424
NC_003155:4592000:4619007461900746203861380Streptomyces avermitilis MA-4680, complete genomeplasmid transfer protein1e-117423
NC_003155:4906639:4911150491115049124451296Streptomyces avermitilis MA-4680, complete genomeplasmid transfer protein1e-107390
NC_013929:3299736:3341591334159133429821392Streptomyces scabiei 87.22 chromosome, complete genomeplasmid transfer protein2e-105382
NC_018750:4333064:4338103433810343394491347Streptomyces venezuelae ATCC 10712, complete genomeputative plasmid transfer protein1e-101370
NC_010572:3925803:3933977393397739353261350Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative plasmid transfer protein9e-100364
NC_021177:3997727:4012040401204040133921353Streptomyces fulvissimus DSM 40593, complete genomePlasmid transfer protein3e-96352
NC_014210:723719:7347047347047360441341Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cell division protein FtsK/SpoIIIE2e-55217
NC_013595:9547254:9559611955961195609631353Streptosporangium roseum DSM 43021, complete genomeDNA segregation ATPase FtsK/SpoIIIE and related protein-like protein4e-51202
NC_014165:92500:99459994591008411383Thermobispora bispora DSM 43833 chromosome, complete genomecell division FtsK/SpoIIIE3e-49196
NC_003888:4314389:4328871432887143301721302Streptomyces coelicolor A3(2), complete genomeftsK/spoIIIE family protein4e-47189
NC_013929:5927935:5938148593814859394581311Streptomyces scabiei 87.22 chromosome, complete genomeFtsK/SpoIIIE family protein9e-47188
NC_015957:1070500:1074060107406010753701311Streptomyces violaceusniger Tu 4113 chromosome, complete genomecell division FtsK/SpoIIIE1e-45184
NC_013510:5115500:5135764513576451371071344Thermomonospora curvata DSM 43183, complete genomecell divisionFtsK/SpoIIIE2e-45183
NC_016582:5393568:5406421540642154077341314Streptomyces bingchenggensis BCW-1 chromosome, complete genomeFtsK/SpoIIIE family protein1e-44181
NC_013093:7437033:7452261745226174537361476Actinosynnema mirum DSM 43827, complete genomecell divisionFtsK/SpoIIIE2e-1170.9
NC_015656:381554:3888553888553904351581Frankia symbiont of Datisca glomerata chromosome, complete genomecell division protein FtsK/SpoIIIE4e-0962.8
NC_014666:13876:2554525545272421698Frankia sp. EuI1c chromosome, complete genomecell division protein FtsK/SpoIIIE1e-0861.6
NC_007777:5087405:5098698509869851002901593Frankia sp. CcI3, complete genomecell divisionFtsK/SpoIIIE9e-0755.5
NC_019673:1420198:1432754143275414342381485Saccharothrix espanaensis DSM 44229 complete genomeCell division protein, FtsK/SpoIIIE family2e-0653.9
NC_014210:1471752:1471752147175214757143963Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cell division protein FtsK/SpoIIIE4e-0653.1