Pre_GI: BLASTP Hits

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Query: NC_002947:1988652:2020045 Pseudomonas putida KT2440, complete genome

Start: 2020045, End: 2021460, Length: 1416

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:1555476:1600792160079216022071416Pseudomonas putida S16 chromosome, complete genomeouter membrane efflux protein0829
NC_005773:1135374:1173415117341511748151401Pseudomonas syringae pv. phaseolicola 1448A, complete genomeouter membrane efflux protein1e-164580
NC_009439:794498:7985177985177998451329Pseudomonas mendocina ymp, complete genomeTolC family type I secretion outer membrane protein6e-88325
NC_011901:491783:5140955140955154171323Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I secretion outer membrane protein, TolC1e-36154
NC_014311:2781898:2782369278236927837541386Ralstonia solanacearum PSI07 chromosome, complete genometype I secretion outer membrane protein, TolC7e-34145
NC_010682:661272:6850996850996865651467Ralstonia pickettii 12J chromosome 1, complete sequencetype I secretion outer membrane protein, TolC family3e-31136
NC_013851:2441407:2443743244374324450861344Allochromatium vinosum DSM 180 chromosome, complete genometype I secretion outer membrane protein, TolC family1e-29131
NC_014394:3036758:3064392306439230657261335Gallionella capsiferriformans ES-2 chromosome, complete genometype I secretion outer membrane protein, TolC family6e-29129
NC_009943:677324:6894536894536908471395Candidatus Desulfococcus oleovorans Hxd3, complete genometype I secretion outer membrane protein, TolC family3e-26119
NC_004578:5623783:5648897564889756503361440Pseudomonas syringae pv. tomato str. DC3000, complete genomeouter membrane efflux protein TolC, putative1e-25118
NC_013353:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009, complete genometransport channel protein TolC3e-24113
AP010958:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009 DNA, complete genometransport channel protein TolC3e-24113
NC_011750:3683760:3683760368376036852411482Escherichia coli IAI39 chromosome, complete genomeouter membrane channel protein9e-24111
NC_010468:694943:7149747149747164551482Escherichia coli ATCC 8739, complete genometype I secretion outer membrane protein, TolC family9e-24111
NC_000913:3176000:3176137317613731776181482Escherichia coli K12, complete genomeouter membrane channel precursor protein9e-24111
CP002516:693703:7124107124107138911482Escherichia coli KO11, complete genometype I secretion outer membrane protein, TolC family9e-24111
NC_010473:3273882:3273882327388232753631482Escherichia coli str. K-12 substr. DH10B, complete genometransport channel9e-24111
NC_012759:3063285:3063285306328530647661482Escherichia coli BW2952 chromosome, complete genomeouter membrane channel protein9e-24111
NC_012947:708064:7267717267717282521482Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane channel protein9e-24111
NC_013364:3840000:3840082384008238415631482Escherichia coli O111:H- str. 11128, complete genometransport channel protein TolC9e-24111
NC_016822:3485631:3485631348563134871121482Shigella sonnei 53G, complete genomeouter membrane channel protein9e-24111
NC_016902:693703:7124107124107138911482Escherichia coli KO11FL chromosome, complete genomeTolC family type I secretion outer membrane protein9e-24111
NC_014836:223013:2490232490232503811359Desulfurispirillum indicum S5 chromosome, complete genomeTolC family type I secretion outer membrane protein2e-22107
NC_020211:1704500:1734374173437417357531380Serratia marcescens WW4, complete genomeTolC family type I secretion outer membrane protein1e-21104
NC_009832:1719149:1749485174948517508641380Serratia proteamaculans 568, complete genometype I secretion outer membrane protein, TolC family3e-21103
NC_008314:2611873:261187326118732612835963Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein5e-2099.4
NC_015422:3366500:3371684337168433730301347Alicycliphilus denitrificans K601 chromosome, complete genometype I secretion outer membrane protein, TolC family5e-2099.4
NC_016612:627118:6271186271186285661449Klebsiella oxytoca KCTC 1686 chromosome, complete genomeouter membrane channel protein6e-2099.4
NC_015567:1660462:1692777169277716941531377Serratia sp. AS9 chromosome, complete genometype I secretion outer membrane protein, TolC family8e-2099
NC_015566:1659288:1692765169276516941411377Serratia sp. AS12 chromosome, complete genometype I secretion outer membrane protein, TolC family8e-2099
NC_005773:951744:9566839566839580891407Pseudomonas syringae pv. phaseolicola 1448A, complete genomeouter membrane efflux protein3e-1997.1
NC_015563:3203012:3203012320301232044871476Delftia sp. Cs1-4 chromosome, complete genometype I secretion outer membrane protein, TolC family3e-1996.7
NC_012912:2426520:2427879242787924292791401Dickeya zeae Ech1591, complete genometype I secretion outer membrane protein, TolC family5e-1996.3
NC_020064:1547524:1575771157577115771471377Serratia marcescens FGI94, complete genometype I secretion outer membrane protein, TolC family1e-1895.1
NC_008391:404388:4082534082534097071455Burkholderia cepacia AMMD chromosome 2, complete sequencetype I secretion outer membrane protein, TolC family5e-1686.3
NC_015856:2146713:2171512217151221728731362Collimonas fungivorans Ter331 chromosome, complete genometype I secretion outer membrane protein, TolC6e-1582.4
NC_015942:2213710:2237484223748422388211338Acidithiobacillus ferrivorans SS3 chromosome, complete genometype I secretion outer membrane protein, TolC family3e-1377
NC_015850:1060000:1079709107970910809921284Acidithiobacillus caldus SM-1 chromosome, complete genometype I secretion outer membrane protein, TolC4e-1376.6
NC_014394:1554373:1573666157366615750331368Gallionella capsiferriformans ES-2 chromosome, complete genometype I secretion outer membrane protein, TolC family4e-1376.6
NC_007512:771975:8013448013448026751332Pelodictyon luteolum DSM 273, complete genomeOuter membrane protein-like5e-1376.3
NC_017505:1783476:1783476178347617848791404Neisseria meningitidis alpha710 chromosome, complete genomeputative periplasmic type I secretion system protein4e-1066.6
NC_017517:1807072:1807072180707218083821311Neisseria meningitidis M01-240355 chromosome, complete genomeputative type I secretion outer membrane protein, TolC family5e-1066.2
NC_016776:625628:6425006425006438311332Bacteroides fragilis 638R, complete genomeputative outer membrane transport/efflux protein2e-0964.3
NC_006347:625328:6390356390356403661332Bacteroides fragilis YCH46, complete genomeputative outer membrane efflux protein4e-0963.2
NC_016625:944925:9436109436109449321323Burkholderia sp. YI23 chromosome 2, complete sequenceTolC family type I secretion outer membrane protein5e-0962.8
NC_014926:819163:8191638191638204521290Thermovibrio ammonificans HB-1 chromosome, complete genomeouter membrane efflux protein7e-0962.4
NC_016632:1399993:1399993139999314013601368Serratia symbiotica str. 'Cinara cedri' chromosome, completeouter membrane channel protein4e-0859.7
NC_007517:3524715:3525824352582435271641341Geobacter metallireducens GS-15, complete genomeOuter membrane efflux protein5e-0859.7
NC_009257:78291:8339583395849241530Francisella tularensis subsp. tularensis WY96-3418 chromosome,TolC family outer membrane efflux protein7e-0755.8
NC_016937:1794651:1809399180939918109281530Francisella tularensis subsp. tularensis TI0902 chromosome,Outer membrane protein TolC9e-0755.5
NC_008245:1794629:1809377180937718109061530Francisella tularensis subsp. tularensis FSC 198, complete genomeouter membrane protein tolC precursor9e-0755.5
NC_006570:1794832:1809580180958018111091530Francisella tularensis subsp. tularensis Schu 4, complete genomeouter membrane protein tolC precursor9e-0755.5
NC_016933:1870558:1885306188530618868351530Francisella tularensis TIGB03 chromosome, complete genomeOuter membrane protein TolC1e-0655.5
NC_011296:102650:1189331189331202491317Thermodesulfovibrio yellowstonii DSM 11347, complete genomeouter membrane efflux protein1e-0655.1
NC_011761:1904637:1921986192198619234761491Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeouter membrane toxin secretion efflux protein2e-0654.3
NC_011206:1792621:1807632180763218091221491Acidithiobacillus ferrooxidans ATCC 53993, complete genomeouter membrane efflux protein2e-0654.3
NC_010677:1784000:1796649179664917981781530Francisella tularensis subsp. mediasiatica FSC147, complete genomeouter membrane efflux protein, TolC3e-0653.9
NC_008601:1811327:1824125182412518256541530Francisella tularensis subsp. novicida U112, complete genomeouter membrane efflux protein, tolC precursor2e-0653.9
NC_007880:1780702:1795635179563517971641530Francisella tularensis subsp. holarctica, complete genomeouter membrane protein tolC precursor3e-0653.5
NC_008369:1780945:1795269179526917967981530Francisella tularensis subsp. holarctica OSU18, complete genomeouter membrane protein tolC precursor3e-0653.5
NC_009749:1776600:1791533179153317930621530Francisella tularensis subsp. holarctica FTA, complete genomeouter membrane protein TolC3e-0653.5
NC_007484:1671835:1691836169183616933411506Nitrosococcus oceani ATCC 19707, complete genomeOuter membrane efflux protein8e-0652.4
NC_016930:293245:3087713087713101471377Rickettsia philipii str. 364D chromosome, complete genomeouter membrane protein tolC9e-0652
NC_013889:1382705:1385254138525413867081455Thioalkalivibrio sp. K90mix chromosome, complete genometype I secretion outer membrane protein, TolC family9e-0652