Query: NC_002940:1065246 Haemophilus ducreyi 35000HP, complete genome
Start: 1065246, End: 1088099, Length: 22854
Host Lineage: Haemophilus ducreyi; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: This strain is a human passage derivative of Haemophilus ducreyi strain 35000 that is serum-resistant. Causative agent of chancroid. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is an obligate human pathogen that causes the sexually transmitted disease chancroid (ulcer of the genital region) and it enhances the transmission of HIV (which enhances Haemophilus ducreyi transmission in turn). This organism is an apparent extracellular pathogen that resists phagocytosis. Some of the virulence factors include an outer membrane serum resistance protein, as well as two toxins, cytolethal distending toxin (CDT) and hemolysin, both of which contribute to tissue destruction.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012913:167034 | 167034 | 191780 | 24747 | Aggregatibacter aphrophilus NJ8700, complete genome | 1e-106 | 394 | BLASTN svg | BLASTP svg |
NC_013416:668152* | 668152 | 698685 | 30534 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 1e-88 | 335 | BLASTN svg | BLASTP svg |
NC_005140:660305 | 660305 | 680923 | 20619 | Vibrio vulnificus YJ016 chromosome II, complete sequence | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_004460:81687 | 81687 | 101735 | 20049 | Vibrio vulnificus CMCP6 chromosome II, complete sequence | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_004547:843475* | 843475 | 864421 | 20947 | Erwinia carotovora subsp. atroseptica SCRI1043, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_012912:3853377* | 3853377 | 3896070 | 42694 | Dickeya zeae Ech1591, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_013716:4306695* | 4306695 | 4398274 | 91580 | Citrobacter rodentium ICC168, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_013716:5201097* | 5201097 | 5276599 | 75503 | Citrobacter rodentium ICC168, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_020260:440000* | 440000 | 468196 | 28197 | Cronobacter sakazakii Sp291, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_004605:741000 | 741000 | 761533 | 20534 | Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014121:4299500* | 4299500 | 4334772 | 35273 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020181:4800298* | 4800298 | 4839055 | 38758 | Enterobacter aerogenes EA1509E, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011083:3171171* | 3171171 | 3191925 | 20755 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004631:3030580* | 3030580 | 3049861 | 19282 | Salmonella enterica subsp. enterica serovar Typhi Ty2, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003198:3042000* | 3042000 | 3064366 | 22367 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |