Pre_GI: BLASTP Hits

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Query: NC_002929:52500:65582 Bordetella pertussis Tohama I, complete genome

Start: 65582, End: 66775, Length: 1194

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from a patient with whooping cough and has been studied extensively for over 40 years. Causative agent of whooping cough. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:51180:6558265582667751194Bordetella pertussis CS chromosome, complete genomeintegral membrane protein0667
NC_002927:506183:5492685492685505391272Bordetella bronchiseptica RB50, complete genomeintegral membrane protein0655
NC_015458:2614108:2627049262704926283291281Pusillimonas sp. T7-7 chromosome, complete genomeintegral membrane protein5e-96351
NC_020911:3159290:3159290315929031606181329Octadecabacter antarcticus 307, complete genomeTRAP transporter large permease subunit DctM9e-30131
NC_017187:325229:3418083418083430881281Arcobacter butzleri ED-1, complete genomeC4-dicarboxylate transport protein1e-28127
NC_020911:3046916:3061821306182130631041284Octadecabacter antarcticus 307, complete genomeputative TRAP transporter large permease DctM subunit3e-28126
NC_020302:85821:1312051312051325181314Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein4e-26119
NC_012108:946314:9669809669809682571278Desulfobacterium autotrophicum HRM2, complete genomeDctM23e-25116
NC_017270:1755552:1765881176588117671641284Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, large permease9e-25114
NC_016445:1363831:1398530139853013998131284Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein9e-25114
NC_012668:1688500:1719095171909517203781284Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system large permease component9e-25114
NC_012578:1838470:1874263187426318755461284Vibrio cholerae M66-2 chromosome I, complete sequenceSialic acid TRAP transporter,large permease9e-25114
NC_009457:1444449:1480233148023314815161284Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein9e-25114
NC_015573:162000:1738181738181750981281Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM2e-24114
NC_014624:2668157:2717023271702327183151293Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-24113
NC_013223:2609697:2636861263686126381651305Desulfohalobium retbaense DSM 5692, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-24113
NC_007503:1111457:1160849116084911621261278Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctM subunit6e-23108
NC_004193:3530000:3540725354072535420321308Oceanobacillus iheyensis HTE831, complete genomeC4-dicarboxylate transport system permease large protein2e-22107
NC_015914:2230076:2252067225206722533411275Cyclobacterium marinum DSM 745 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM2e-22107
NC_016048:3856665:3864869386486938661491281Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter3e-22106
NC_014041:3197192:3201402320140232026911290Zunongwangia profunda SM-A87 chromosome, complete genomedctM-like transporter3e-21103
NC_009997:3483157:3502031350203135034281398Shewanella baltica OS195, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-21103
NC_016901:3430401:3449243344924334506401398Shewanella baltica OS678 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM2e-21103
NC_015730:921735:9232579232579245611305Roseobacter litoralis Och 149 chromosome, complete genomeTRAP transporter subunit DctM4e-21102
NC_015224:1914833:1919407191940719206991293Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative C4-dicarboxylate transporter, large subunit4e-21102
NC_020210:661236:6747896747896760661278Geobacillus sp. GHH01, complete genomeTRAP dicarboxylate transporter DctM subunit6e-21102
NC_016593:762216:7912007912007924771278Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTRAP dicarboxylate transporter subunit DctM7e-21102
NC_009654:304000:3171453171453184221278Marinomonas sp. MWYL1, complete genomeTRAP dicarboxylate transporter, DctM subunit9e-21101
NC_006155:1916426:1951170195117019524621293Yersinia pseudotuberculosis IP 32953, complete genomeTRAP-T family C4-dicarboxylate transporter, large (DctM) subunit1e-20100
NC_010634:1916000:1951154195115419524461293Yersinia pseudotuberculosis PB1/+, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-20100
NC_016642:1990684:2007838200783820091601323Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM5e-2099
NC_016513:1761830:1770128177012817714291302Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative tRAP C4-dicarboxylate transport system permease DctM subunit9e-2098.2
NC_007778:3784104:3806304380630438075961293Rhodopseudomonas palustris HaA2, complete genomeTRAP dicarboxylate transporter DctM subunit3e-1996.7
NC_003911:1791878:1838069183806918393461278Silicibacter pomeroyi DSS-3, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-1996.3
NC_015565:1511426:1526543152654315278231281Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctM4e-1892.8
NC_016642:1913432:1934315193431519356101296Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM8e-1891.7
NC_015259:485015:5600805600805620982019Polymorphum gilvum SL003B-26A1 chromosome, complete genomehypothetical protein2e-1790.5
NC_003454:1889529:1912010191201019132961287Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeC4-dicarboxylate transporter large subunit3e-1789.7
NC_016943:4194002:4199365419936542006571293Blastococcus saxobsidens DD2, complete genomeTRAP dicarboxylate transporter-DctM subunit4e-1789.4
NC_014532:2664139:2676699267669926779671269Halomonas elongata DSM 2581, complete genomeTRAP transporter large transmembrane protein4e-1789.4
NC_014219:999648:1022714102271410239851272Bacillus selenitireducens MLS10 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit8e-1788.2
NC_016048:3667890:3677840367784036791261287Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter1e-1687.8
NC_009439:4404942:4425205442520544265001296Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-1686.3
NC_008751:607209:6283096283096302131905Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeTRAP dicarboxylate transporter, DctM subunit5e-1685.9
NC_013740:2218215:2230154223015422314521299Acidaminococcus fermentans DSM 20731, complete genomeTRAP dicarboxylate transporter, DctM subunit5e-1685.9
NC_019978:2532640:2544611254461125459001290Halobacteroides halobius DSM 5150, complete genomeTRAP transporter, DctM subunit7e-1685.1
NC_015500:78223:1043021043021056001299Treponema brennaborense DSM 12168 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit8e-1685.1
NC_008212:1386834:1410746141074614120441299Haloquadratum walsbyi DSM 16790, complete genomeTRAP-type C4-dicarboxylate transport system,large permease component DctM (YiaN)9e-1685.1
NC_007963:1190847:1213144121314412144241281Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-1584
NC_008043:86470:1030161030161045211506Silicibacter sp. TM1040 mega plasmid, complete sequenceTRAP C4-dicarboxylate transport system permease DctM subunit4e-1582.8
NC_015589:2447132:2451124245112424524041281Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAP dicarboxylate transporter DctM subunit8e-1582
NC_007963:317291:3189413189413202631323Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-1480.5
NC_011892:352652:3636273636273655581932Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTRAP dicarboxylate transporter, DctM subunit2e-1480.5
NC_014532:2989185:3002435300243530037181284Halomonas elongata DSM 2581, complete genomeTRAP transporter large transmembrane protein2e-1480.5
NC_016048:308342:3413263413263426121287Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter1e-1378.2
NC_009952:592000:5978205978205991061287Dinoroseobacter shibae DFL 12, complete genomeTRAP dicarboxylate transporter1e-1378.2
NC_018691:198909:2205252205252218321308Alcanivorax dieselolei B5 chromosome, complete genomePutative membrane protein (TrapT family, dctM subunit transport)2e-1377
NC_011992:1968258:1996155199615519974351281Acidovorax ebreus TPSY, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-1376.6
NC_015152:2887414:2898767289876729000351269Spirochaeta sp. Buddy chromosome, complete genomeTRAP dicarboxylate transporter DctM subunit5e-1375.9
NC_014011:1760793:1792999179299917942821284Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit6e-1375.5
NC_015458:1692401:1697018169701816983161299Pusillimonas sp. T7-7 chromosome, complete genomeputative inner membrane protein8e-1375.1
NC_014532:2268078:2270444227044422717511308Halomonas elongata DSM 2581, complete genomeTRAP transporter large transmembrane protein1e-1274.7
NC_006510:1995916:2016959201695920182421284Geobacillus kaustophilus HTA426, complete genometransporter1e-1274.3
NC_014206:1618988:1620632162063216219151284Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM1e-1274.3
NC_008254:3143770:3153601315360131548631263Mesorhizobium sp. BNC1, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit2e-1273.9
NC_008209:695269:7138507138507151451296Roseobacter denitrificans OCh 114, complete genomeTRAP-type C4-dicarboxylate transport protein, permease component3e-1273.6
NC_011661:1807101:1807101180710118083841284Dictyoglomus turgidum DSM 6724, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-1273.2
NC_018643:1309804:1334962133496213363231362Alpha proteobacterium HIMB5 chromosome, complete genomeDctM family transporter5e-1272.4
NC_008596:3404832:3425722342572234270831362Mycobacterium smegmatis str. MC2 155, complete genomeTRAP transporter, DctM-like membrane protein5e-1272.4
NC_014532:2298628:2308166230816623094641299Halomonas elongata DSM 2581, complete genomepossible integral membrane transport protein6e-1272.4
NC_003911:3864852:3864852386485238661651314Silicibacter pomeroyi DSS-3, complete genomeTRAP dicarboxylate family transporter, DctM subunit9e-1271.6
NC_004463:2344128:2345192234519223470841893Bradyrhizobium japonicum USDA 110, complete genomeprobable ABC transporter permease protein1e-1171.2
NC_011386:931140:9469529469529482591308Oligotropha carboxidovorans OM5, complete genometrap-type c4-dicarboxylate transport system1e-1171.2
NC_015684:3157941:3176197317619731775041308Oligotropha carboxidovorans OM5 chromosome, complete genomeTRAP transport system, large permease1e-1171.2
NC_017249:7917586:7935099793509979368981800Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1171.2
NC_015519:1888917:1888917188891718902061290Tepidanaerobacter sp. Re1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM1e-1171.2
NC_016629:3789554:3829995382999538313081314Desulfovibrio africanus str. Walvis Bay chromosome, completeTRAP dicarboxylate transporter subunit DctM2e-1170.9
NC_009342:2528426:2540410254041025417261317Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-1170.5
NC_007644:416000:4272074272074284871281Moorella thermoacetica ATCC 39073, complete genomeTRAP dicarboxylate transporter- DctM subunit3e-1170.1
NC_014011:1354261:1369461136946113707501290Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-1170.1
NC_004337:3590323:3726551372655137278431293Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-1170.1
NC_021066:3028421:3046182304618230480561875Raoultella ornithinolytica B6, complete genomehypothetical protein4e-1169.7
NC_009142:5647737:5647737564773756490411305Saccharopolyspora erythraea NRRL 2338, complete genomeC4-dicarboxylate transport system (permease large protein)4e-1169.3
NC_007963:3574000:3580097358009735813891293Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit1e-1068.2
NC_020908:1920169:1931692193169219329661275Octadecabacter arcticus 238, complete genomeTRAP transporter DctM subunit1e-1067.8
NC_008209:1385094:1400878140087814021941317Roseobacter denitrificans OCh 114, complete genomeTrapT family, DctM subunit, putative1e-1067.8
NC_007645:3688000:3689930368993036912521323Hahella chejuensis KCTC 2396, complete genomeTRAP-type mannitol/chloroaromatic compound transport system, large permease component2e-1067
NC_009832:110239:1300111300111318821872Serratia proteamaculans 568, complete genomeTRAP dicarboxylate transporter, DctM subunit4e-1066.2
NC_008260:2442000:2453494245349424547741281Alcanivorax borkumensis SK2, complete genomeTRAP-type C4-dicarboxylate transport system,large permease component4e-1066.2
NC_014010:484000:5067365067365080491314Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTRAP dicarboxylate transporter- DctM subunit5e-1065.9
NC_008392:666000:6847736847736861251353Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctM subunit6e-1065.9
NC_010506:2146444:2157756215775621590421287Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-0964.7
NC_013855:558831:5716875716875735791893Azospirillum sp. B510 plasmid pAB510a, complete sequenceTRAP C4-dicarboxylate transport system permease DctM subunit2e-0964.3
NC_020302:3014483:3031541303154130328511311Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein2e-0963.9
NC_007509:1043602:1047077104707710484291353Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctM subunit2e-0963.5
NC_015259:624979:6249796249796263971419Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit4e-0962.8
NC_018581:759932:7741617741617756781518Gordonia sp. KTR9 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system, large permease component6e-0962.4
NC_015859:1069116:1079432107943210807181287Corynebacterium variabile DSM 44702 chromosome, complete genomeTRAP dicarboxylate transporter subunit6e-0962.4
NC_013416:1429881:143615714361571437140984Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-0861.6
NC_005296:2860000:2882000288200028833581359Rhodopseudomonas palustris CGA009, complete genomeTrapT family, dctM subunit, C4-dicarboxylate transport1e-0861.6
NC_006569:370846:3742383742383755031266Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceTRAP dicarboxylate transporter, DctM subunit1e-0861.2
NC_016943:4194002:4234469423446942357641296Blastococcus saxobsidens DD2, complete genomeTRAP transporter subunit DctM2e-0860.8
NC_007484:755058:7681097681097694371329Nitrosococcus oceani ATCC 19707, complete genomeTRAP dicarboxylate transporter, DctM subunit7e-0858.9
NC_007802:3575739:3575739357573935771841446Jannaschia sp. CCS1, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit8e-0858.5
NC_007963:2777066:2783855278385527851351281Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit9e-0858.5
NC_009663:851143:8511438511438530141872Sulfurovum sp. NBC37-1, complete genomeC4-dicarboxylate transporter, permease9e-0858.5
NC_017082:3717939:3719614371961437215091896Bradyrhizobium sp. S23321, complete genomeputative TRAP-type C4-dicarboxylate transport system1e-0757.8
NC_008820:2512518:2514204251420425155741371Prochlorococcus marinus str. MIT 9303, complete genomepossible Tripartite transporter component (TRAP-T family)2e-0757
NC_007802:2026500:2042505204250520438121308Jannaschia sp. CCS1, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-0757
NC_011894:3161289:3176689317668931785871899Methylobacterium nodulans ORS 2060, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit4e-0756.2
NC_015573:813000:8418708418708431561287Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM4e-0756.2
NC_016745:546249:5573915573915586801290Oceanimonas sp. GK1 chromosome, complete genomeTRAP C4-dicarboxylate transport system permease DctM5e-0755.8
NC_007948:5026122:5027642502764250289641323Polaromonas sp. JS666, complete genomeTRAP dicarboxylate transporter- DctM subunit2e-0654.3
NC_015276:1426000:1426551142655114278851335Marinomonas mediterranea MMB-1 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-0653.9
NC_008344:669498:6910706910706923531284Nitrosomonas eutropha C91, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-0653.5
NC_010552:2454776:2471838247183824737481911Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceTRAP dicarboxylate transporter, DctM subunit3e-0653.5