Pre_GI: BLASTP Hits

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Query: NC_000962:1684005:1706630 Mycobacterium tuberculosis H37Rv, complete genome

Start: 1706630, End: 1707526, Length: 897

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002755:1684161:170678517067851707771987Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein8e-178622
NC_009565:1688642:171126717112671712163897Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-177622
NC_009525:1685522:170814717081471709043897Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-177622
NC_015848:1708176:173080817308081731704897Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-176618
NC_019950:1689910:171139317113931712289897Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein1e-176618
NC_017026:1686500:170766617076661708520855Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-168592
NC_016609:701500:713946713946714770825Niastella koreensis GR20-10 chromosome, complete genometype 11 methyltransferase2e-48192
NC_015380:99919:117514117514118242729Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase6e-0755.1