Pre_GI: BLASTN Hits

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Query: NC_015975:789312 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Start: 789312, End: 811626, Length: 22315

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015975:752927*75292777561922693Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-170607BLASTN svgBLASTP svg
NC_015975:1056731*1056731108723230502Lactobacillus ruminis ATCC 27782 chromosome, complete genome5e-168599BLASTN svgBLASTP svg
NC_015975:15937971593797161660922813Lactobacillus ruminis ATCC 27782 chromosome, complete genome5e-51210BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_009725:1159637*1159637118492325287Bacillus amyloliquefaciens FZB42, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015975:558523*55852358623227710Lactobacillus ruminis ATCC 27782 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020410:1123121*1123121115431431194Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7e-1073.8BLASTN svgBLASTP svg
NC_019842:12032911203291122747424184Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_012470:258287*25828727791519629Streptococcus equi subsp. zooepidemicus, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010001:14880001488000151119123192Clostridium phytofermentans ISDg, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014334:1775781*1775781179812122341Lactobacillus casei str. Zhang chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013165:22403772240377227376133385Slackia heliotrinireducens DSM 20476, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008525:108687*10868714459935913Pediococcus pentosaceus ATCC 25745, complete genome3e-0661.9BLASTN svgBLASTP svg