Pre_GI: BLASTN Hits

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Query: NC_015957:8845274 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 8845274, End: 8875616, Length: 30343

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:11513311513313815023018Streptomyces violaceusniger Tu 4113 chromosome, complete genome02635BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome02613BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome02569BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome01245BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome0688BLASTN svgBLASTP svg
NC_003155:92149492149494438122888Streptomyces avermitilis MA-4680, complete genome3e-176626BLASTN svgBLASTP svg
NC_003888:3138905*3138905316269723793Streptomyces coelicolor A3(2), complete genome4e-117430BLASTN svgBLASTP svg
NC_014318:85900788590078860983119754Amycolatopsis mediterranei U32 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_006087:1483761*1483761150739223632Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014623:70932037093203711580022598Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015957:5082172*5082172510412921958Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015656:36534403653440367842924990Frankia symbiont of Datisca glomerata chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_015848:2684275*2684275270528621012Mycobacterium canettii CIPT 140010059, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010612:4501414*4501414452499223579Mycobacterium marinum M, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010572:40248104024810404598521176Streptomyces griseus subsp. griseus NBRC 13350, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome4e-0971.9BLASTN svgBLASTP svg
NC_018750:3859127*3859127387774018614Streptomyces venezuelae ATCC 10712, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013093:21322842132284215260320320Actinosynnema mirum DSM 43827, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010617:14289021428902145226023359Kocuria rhizophila DC2201, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009921:3473854*3473854352959955746Frankia sp. EAN1pec, complete genome4e-0661.9BLASTN svgBLASTP svg