Query: NC_015410:3701000 Pseudomonas mendocina NK-01 chromosome, complete genome
Start: 3701000, End: 3723900, Length: 22901
Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009439:3394174* | 3394174 | 3419255 | 25082 | Pseudomonas mendocina ymp, complete genome | 0 | 4508 | BLASTN svg | BLASTP svg |
| NC_015410:3502099* | 3502099 | 3528159 | 26061 | Pseudomonas mendocina NK-01 chromosome, complete genome | 0 | 1183 | BLASTN svg | BLASTP svg |
| NC_008463:4389721* | 4389721 | 4416635 | 26915 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
| NC_002516:1236644* | 1236644 | 1263166 | 26523 | Pseudomonas aeruginosa PAO1, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
| NC_006513:1547092 | 1547092 | 1565877 | 18786 | Azoarcus sp. EbN1, complete genome | 3e-43 | 184 | BLASTN svg | BLASTP svg |
| NC_006350:1084930* | 1084930 | 1121910 | 36981 | Burkholderia pseudomallei K96243 chromosome 1, complete sequence | 1e-39 | 172 | BLASTN svg | BLASTP svg |
| NC_014323:4792048* | 4792048 | 4836099 | 44052 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
| NC_020209:945000* | 945000 | 968099 | 23100 | Pseudomonas poae RE*1-1-14, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
| NC_020064:1501441 | 1501441 | 1519843 | 18403 | Serratia marcescens FGI94, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
| NC_009997:2635025 | 2635025 | 2666893 | 31869 | Shewanella baltica OS195, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_003919:5023500 | 5023500 | 5046599 | 23100 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_009434:695582 | 695582 | 767394 | 71813 | Pseudomonas stutzeri A1501, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_014217:3431878* | 3431878 | 3457783 | 25906 | Starkeya novella DSM 506 chromosome, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_015856:2488297 | 2488297 | 2521146 | 32850 | Collimonas fungivorans Ter331 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_007974:785216 | 785216 | 808249 | 23034 | Ralstonia metallidurans CH34 chromosome 2, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009439:3535152 | 3535152 | 3555614 | 20463 | Pseudomonas mendocina ymp, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015556:515641 | 515641 | 538556 | 22916 | Pseudomonas fulva 12-X chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_009439:1174432* | 1174432 | 1199736 | 25305 | Pseudomonas mendocina ymp, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009439:4404942* | 4404942 | 4429883 | 24942 | Pseudomonas mendocina ymp, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010694:1932126 | 1932126 | 1956500 | 24375 | Erwinia tasmaniensis, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_007712:2978000 | 2978000 | 3000203 | 22204 | Sodalis glossinidius str. 'morsitans', complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015410:3791500* | 3791500 | 3812925 | 21426 | Pseudomonas mendocina NK-01 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_012214:124337 | 124337 | 143803 | 19467 | Erwinia pyrifoliae Ep1/96, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_007645:1443296 | 1443296 | 1467599 | 24304 | Hahella chejuensis KCTC 2396, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |