Query: NC_013714:2294342 Bifidobacterium dentium Bd1, complete genome
Start: 2294342, End: 2325817, Length: 31476
Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_004307:1815825 | 1815825 | 1848775 | 32951 | Bifidobacterium longum NCC2705, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_018720:357716* | 357716 | 386867 | 29152 | Bifidobacterium asteroides PRL2011 chromosome, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
| NC_012815:1757992* | 1757992 | 1780407 | 22416 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 4e-40 | 174 | BLASTN svg | BLASTP svg |
| NC_012814:1757753* | 1757753 | 1780635 | 22883 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 4e-40 | 174 | BLASTN svg | BLASTP svg |
| NC_015067:2136048 | 2136048 | 2168969 | 32922 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
| NC_010816:1852406 | 1852406 | 1879629 | 27224 | Bifidobacterium longum DJO10A, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_015052:1771976* | 1771976 | 1800283 | 28308 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| CU928160:2155947 | 2155947 | 2187365 | 31419 | Escherichia coli IAI1 chromosome, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| AC_000091:2096672 | 2096672 | 2126657 | 29986 | Escherichia coli W3110 DNA, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| CU928145:2324495 | 2324495 | 2354933 | 30439 | Escherichia coli 55989 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_000913:2092559 | 2092559 | 2121099 | 28541 | Escherichia coli K12, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_004337:2098736 | 2098736 | 2128599 | 29864 | Shigella flexneri 2a str. 301, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_004431:2383901 | 2383901 | 2414726 | 30826 | Escherichia coli CFT073, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_004741:2081649 | 2081649 | 2113006 | 31358 | Shigella flexneri 2a str. 2457T, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008253:2134110 | 2134110 | 2164062 | 29953 | Escherichia coli 536, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008258:2100646 | 2100646 | 2131889 | 31244 | Shigella flexneri 5 str. 8401, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015052:2181514 | 2181514 | 2213818 | 32305 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011748:2324495 | 2324495 | 2354933 | 30439 | Escherichia coli 55989, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010473:2183567 | 2183567 | 2212099 | 28533 | Escherichia coli str. K-12 substr. DH10B, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010468:1775000 | 1775000 | 1805182 | 30183 | Escherichia coli ATCC 8739, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009801:2276131 | 2276131 | 2307531 | 31401 | Escherichia coli E24377A, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008563:2182270 | 2182270 | 2211564 | 29295 | Escherichia coli APEC O1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_021150:1564229 | 1564229 | 1595034 | 30806 | Azotobacter vinelandii CA6, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_012560:1564500 | 1564500 | 1593800 | 29301 | Azotobacter vinelandii DJ, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010658:1090104 | 1090104 | 1121599 | 31496 | Shigella boydii CDC 3083-94, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008262:784878* | 784878 | 829910 | 45033 | Clostridium perfringens SM101, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |