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Query: NC_013714:2294342 Bifidobacterium dentium Bd1, complete genome

Start: 2294342, End: 2325817, Length: 31476

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome2e-44188BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_012815:1757992*1757992178040722416Bifidobacterium animalis subsp. lactis DSM 10140, complete genome4e-40174BLASTN svgBLASTP svg
NC_012814:1757753*1757753178063522883Bifidobacterium animalis subsp. lactis Bl-04, complete genome4e-40174BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-38168BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015052:1771976*1771976180028328308Bifidobacterium longum subsp. infantis 157F, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010468:17750001775000180518230183Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012560:15645001564500159380029301Azotobacter vinelandii DJ, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008262:784878*78487882991045033Clostridium perfringens SM101, complete genome4e-0661.9BLASTN svgBLASTP svg