Pre_GI: BLASTN Hits

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Query: NC_013316:796895 Clostridium difficile R20291, complete genome

Start: 796895, End: 821769, Length: 24875

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009089:87329587329590009926805Clostridium difficile 630, complete genome020500BLASTN svgBLASTP svg
NC_014328:40737144073714410040726694Clostridium ljungdahlii ATCC 49587 chromosome, complete genome8e-90339BLASTN svgBLASTP svg
NC_014614:13092031309203133281723615Clostridium sticklandii, complete genome3e-86327BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome9e-19103BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008593:153014*15301417175318740Clostridium novyi NT, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010723:173280*17328022135248073Clostridium botulinum E3 str. Alaska E43, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015958:2361551*2361551238227520725Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020291:117983*11798315068032698Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018515:3600869*3600869363009929231Desulfosporosinus meridiei DSM 13257 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015519:58600058600060725221253Tepidanaerobacter sp. Re1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014150:23999972399997242070520709Brachyspira murdochii DSM 12563 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg