Query: NC_013316:4095905 Clostridium difficile R20291, complete genome
Start: 4095905, End: 4129996, Length: 34092
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009089:3935500* | 3935500 | 3979165 | 43666 | Clostridium difficile 630, complete genome | 0 | 3590 | BLASTN svg | BLASTP svg |
| NC_009089:428075 | 428075 | 466356 | 38282 | Clostridium difficile 630, complete genome | 0 | 3313 | BLASTN svg | BLASTP svg |
| NC_015977:2966971 | 2966971 | 2992099 | 25129 | Roseburia hominis A2-183 chromosome, complete genome | 0 | 1790 | BLASTN svg | BLASTP svg |
| NC_009089:581655 | 581655 | 606563 | 24909 | Clostridium difficile 630, complete genome | 5e-30 | 141 | BLASTN svg | BLASTP svg |
| NC_009089:3782000 | 3782000 | 3804099 | 22100 | Clostridium difficile 630, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_021175:1597613 | 1597613 | 1621108 | 23496 | Streptococcus oligofermentans AS 1.3089, complete genome | 8e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_013895:1332832 | 1332832 | 1380099 | 47268 | Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete | 8e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_002758:434462 | 434462 | 452818 | 18357 | Staphylococcus aureus subsp. aureus Mu50, complete genome | 5e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_009089:1283000 | 1283000 | 1324218 | 41219 | Clostridium difficile 630, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_009089:3889811 | 3889811 | 3921485 | 31675 | Clostridium difficile 630, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_013798:1778758 | 1778758 | 1803165 | 24408 | Streptococcus gallolyticus UCN34, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_015385:2050648* | 2050648 | 2082918 | 32271 | Treponema succinifaciens DSM 2489 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_004668:2198027* | 2198027 | 2270099 | 72073 | Enterococcus faecalis V583, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013798:1744118 | 1744118 | 1763316 | 19199 | Streptococcus gallolyticus UCN34, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_013316:891782 | 891782 | 914347 | 22566 | Clostridium difficile R20291, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009089:965959 | 965959 | 988337 | 22379 | Clostridium difficile 630, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |