Pre_GI: BLASTN Hits

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Query: NC_012808:1979000 Methylobacterium extorquens AM1, complete genome

Start: 1979000, End: 1997405, Length: 18406

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome6e-161575BLASTN svgBLASTP svg
NC_012808:19205001920500194126820769Methylobacterium extorquens AM1, complete genome7e-139502BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome1e-97365BLASTN svgBLASTP svg
NC_012811:22754122754127111643576Methylobacterium extorquens AM1 megaplasmid, complete sequence3e-92347BLASTN svgBLASTP svg
NC_012792:38567038567040991424245Variovorax paradoxus S110 chromosome 2, complete genome3e-79303BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome2e-71278BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome1e-69272BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome1e-69272BLASTN svgBLASTP svg
NC_007964:32882532882536913940315Nitrobacter hamburgensis X14, complete genome2e-68268BLASTN svgBLASTP svg
NC_011004:11748131174813119811023298Rhodopseudomonas palustris TIE-1, complete genome2e-65258BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome1e-47198BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome2e-40174BLASTN svgBLASTP svg
NC_010338:58800058800061124723248Caulobacter sp. K31, complete genome5e-29137BLASTN svgBLASTP svg
NC_009138:15448351544835157592231088Herminiimonas arsenicoxydans, complete genome4e-26127BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome2e-25125BLASTN svgBLASTP svg
NC_011004:1136895*1136895116187724983Rhodopseudomonas palustris TIE-1, complete genome7e-25123BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome6e-19103BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_010338:2443765*2443765246613122367Caulobacter sp. K31, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_012808:40984654098465412359925135Methylobacterium extorquens AM1, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_012811:31730831730834221324906Methylobacterium extorquens AM1 megaplasmid, complete sequence1e-1385.7BLASTN svgBLASTP svg
NC_010125:3067301*3067301309201524715Gluconacetobacter diazotrophicus PAl 5, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_006677:2402282*2402282243318430903Gluconobacter oxydans 621H, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_005956:818000*81800084009922100Bartonella henselae str. Houston-1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014394:25779492577949260071922771Gallionella capsiferriformans ES-2 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006677:2575345*2575345259598120637Gluconobacter oxydans 621H, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010725:45119394511939454748235544Methylobacterium populi BJ001, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003902:29331212933121295986926749Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-0765.9BLASTN svgBLASTP svg
NC_003919:3060484*3060484309971939236Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007086:19365051936505197809941595Xanthomonas campestris pv. campestris str. 8004, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007508:31836313183631322068237052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete1e-0765.9BLASTN svgBLASTP svg
NC_010688:19080121908012196474456733Xanthomonas campestris pv. campestris, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012808:157156*15715618609928944Methylobacterium extorquens AM1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013722:2150882*2150882218450433623Xanthomonas albilineans, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014924:936158*93615896352527368Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003317:1030220*1030220105366423445Brucella melitensis 16M chromosome I, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015383:22903622903624724318208Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_012856:10800001080000110535625357Ralstonia pickettii 12D chromosome 1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015593:797675*79767582008322409Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete2e-0661.9BLASTN svgBLASTP svg
NC_018664:985689*985689100461118923Clostridium acidurici 9a chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_018664:3009166*3009166304846639301Clostridium acidurici 9a chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014664:49390049390051632122422Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_007958:4371125*4371125441443443310Rhodopseudomonas palustris BisB5, complete genome9e-0660BLASTN svgBLASTP svg