Pre_GI: BLASTN Hits

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Query: NC_012225:2247796 Brachyspira hyodysenteriae WA1, complete genome

Start: 2247796, End: 2267631, Length: 19836

Host Lineage: Brachyspira hyodysenteriae; Brachyspira; Brachyspiraceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Brachyspira hyodysenteriae is the causative agent of swine dysentery, which is a severe mucohemorrhagic diarrheal disease of pigs that has economic significance for pork-producing countries. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019908:2312194*2312194233353121338Brachyspira pilosicoli P43/6/78 chromosome, complete genome01756BLASTN svgBLASTP svg
NC_014330:888366*88836691146423099Brachyspira pilosicoli 95/1000 chromosome, complete genome01748BLASTN svgBLASTP svg
NC_018607:2231975*2231975225336921395Brachyspira pilosicoli B2904 chromosome, complete genome01721BLASTN svgBLASTP svg
NC_018604:2350054*2350054237001019957Brachyspira pilosicoli WesB complete genome01701BLASTN svgBLASTP svg
NC_014150:14237581423758144633922582Brachyspira murdochii DSM 12563 chromosome, complete genome0650BLASTN svgBLASTP svg
NC_012225:12134211213421123659923179Brachyspira hyodysenteriae WA1, complete genome2e-28135BLASTN svgBLASTP svg
NC_010723:10143341014334103372419391Clostridium botulinum E3 str. Alaska E43, complete genome3e-27131BLASTN svgBLASTP svg
NC_019908:1296870*1296870131523618367Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_014330:1957725*1957725197782020096Brachyspira pilosicoli 95/1000 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_015696:610000*61000065257442575Francisella sp. TX077308 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_014964:55791055791057776519856Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete1e-20109BLASTN svgBLASTP svg
NC_018604:838932*83893286441725486Brachyspira pilosicoli WesB complete genome2e-19105BLASTN svgBLASTP svg
NC_012225:1375362*1375362139367018309Brachyspira hyodysenteriae WA1, complete genome2e-19105BLASTN svgBLASTP svg
NC_019908:10434011043401106827224872Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_019908:46328146328148754024260Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020291:50931385093138512061727480Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015391:2059191*2059191209896139771Carnobacterium sp. 17-4 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014150:1006000*1006000102850522506Brachyspira murdochii DSM 12563 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008262:784878*78487882991045033Clostridium perfringens SM101, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012225:14979341497934152218824255Brachyspira hyodysenteriae WA1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014150:2088012*2088012212109933088Brachyspira murdochii DSM 12563 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_018607:1313035*1313035134237429340Brachyspira pilosicoli B2904 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020291:39000463900046392536225317Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015687:14786681478668150267124004Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010723:31333023133302315353220231Clostridium botulinum E3 str. Alaska E43, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010336:1117325*1117325114783030506Francisella philomiragia subsp. philomiragia ATCC 25017, complete4e-1177.8BLASTN svgBLASTP svg
NC_012225:28346422834642285938124740Brachyspira hyodysenteriae WA1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014654:1*12910529105Halanaerobium sp. 'sapolanicus' chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_018604:15340741534074155448520412Brachyspira pilosicoli WesB complete genome4e-1177.8BLASTN svgBLASTP svg
NC_019908:641321*64132166828426964Brachyspira pilosicoli P43/6/78 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_018607:15059081505908154680040893Brachyspira pilosicoli B2904 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014330:19544719544722875533309Brachyspira pilosicoli 95/1000 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_005957:1037205*1037205105595618752Bacillus thuringiensis serovar konkukian str. 97-27, complete6e-1073.8BLASTN svgBLASTP svg
NC_012225:19016561901656192114319488Brachyspira hyodysenteriae WA1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006274:1040836*1040836105962518790Bacillus cereus E33L, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006570:141966*14196617413932174Francisella tularensis subsp. tularensis Schu 4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008245:141982*14198217415532174Francisella tularensis subsp. tularensis FSC 198, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010677:214712*21471224609931388Francisella tularensis subsp. mediasiatica FSC147, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014150:64886864886867345624589Brachyspira murdochii DSM 12563 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003997:1007139*1007139102671019572Bacillus anthracis str. Ames, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004722:10085001008500103115022651Bacillus cereus ATCC 14579, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_005945:1008000*1008000102660318604Bacillus anthracis str. Sterne, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007530:1007140*1007140102671019571Bacillus anthracis str. 'Ames Ancestor', complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008600:1042477*1042477106188519409Bacillus thuringiensis str. Al Hakam, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010184:1017000*1017000103592118922Bacillus weihenstephanensis KBAB4, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014330:697429*69742972243325005Brachyspira pilosicoli 95/1000 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019978:2036779*2036779205929022512Halobacteroides halobius DSM 5150, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019908:852230*85223087389021661Brachyspira pilosicoli P43/6/78 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019908:21832152183215220322320009Brachyspira pilosicoli P43/6/78 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019978:12440001244000126570721708Halobacteroides halobius DSM 5150, complete genome9e-0660BLASTN svgBLASTP svg
NC_018607:2472250*2472250249712524876Brachyspira pilosicoli B2904 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015577:14628741462874149362030747Treponema azotonutricium ZAS-9 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014150:2055907*2055907207895323047Brachyspira murdochii DSM 12563 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_013316:25856662585666260952923864Clostridium difficile R20291, complete genome9e-0660BLASTN svgBLASTP svg
NC_012225:47800478008109933300Brachyspira hyodysenteriae WA1, complete genome9e-0660BLASTN svgBLASTP svg