Pre_GI: BLASTN Hits

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Query: NC_012225:1657248 Brachyspira hyodysenteriae WA1, complete genome

Start: 1657248, End: 1683048, Length: 25801

Host Lineage: Brachyspira hyodysenteriae; Brachyspira; Brachyspiraceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Brachyspira hyodysenteriae is the causative agent of swine dysentery, which is a severe mucohemorrhagic diarrheal disease of pigs that has economic significance for pork-producing countries. The bacterium can survive for several weeks in cold moist conditions but not under warm dry conditions. It spreads slowly, building up in numbers as the dose rate of the causal agent builds up in the environment. Pigs that recover develop a low immunity and rarely suffer from the disease again. It can be spread by other organisms (flies, mice, birds and dogs) or external mechanical factors; its main habitat is the porcine cecum and colon. It is chemotactically attracted to mucin which it penetrates with a corkscrew-like motility.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018604:2303239*2303239232188618648Brachyspira pilosicoli WesB complete genome02189BLASTN svgBLASTP svg
NC_014330:841841*84184186434222502Brachyspira pilosicoli 95/1000 chromosome, complete genome02173BLASTN svgBLASTP svg
NC_018607:2184832*2184832220348618655Brachyspira pilosicoli B2904 chromosome, complete genome02165BLASTN svgBLASTP svg
NC_012225:23335002333500235557622077Brachyspira hyodysenteriae WA1, complete genome2e-109404BLASTN svgBLASTP svg
NC_012225:2611680*2611680263312921450Brachyspira hyodysenteriae WA1, complete genome3e-34155BLASTN svgBLASTP svg
NC_010520:31205003120500313949618997Clostridium botulinum A3 str. Loch Maree, complete genome4e-21111BLASTN svgBLASTP svg
NC_014328:93839393839395781019418Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NS_000191:344000*34400036288218883Uncultured Termite group 1 bacterium phylotype Rs-D17, complete2e-1385.7BLASTN svgBLASTP svg
NC_014166:455378*45537847468719310Arcobacter nitrofigilis DSM 7299 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003030:15100001510000154543435435Clostridium acetobutylicum ATCC 824, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008593:16314381631438165059619159Clostridium novyi NT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008262:784878*78487882991045033Clostridium perfringens SM101, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_003366:84200084200086047418475Clostridium perfringens str. 13, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_019908:121178*12117816296041783Brachyspira pilosicoli P43/6/78 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_018607:921923*92192396497843056Brachyspira pilosicoli B2904 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010516:29000572900057292557925523Clostridium botulinum B1 str. Okra, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004557:2078000*2078000210049622497Clostridium tetani E88, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008262:1835613*1835613185504319431Clostridium perfringens SM101, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010001:3369500*3369500339588026381Clostridium phytofermentans ISDg, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012985:465354*46535449959934246Candidatus Liberibacter asiaticus str. psy62, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009004:1770497*1770497179533924843Lactococcus lactis subsp. cremoris MG1363, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008527:740060*74006076330623247Lactococcus lactis subsp. cremoris SK11, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002952:1291444*1291444131490923466Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006570:24636*246367715752522Francisella tularensis subsp. tularensis Schu 4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008245:24652*246526389439243Francisella tularensis subsp. tularensis FSC 198, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010677:96470*9647014828851819Francisella tularensis subsp. mediasiatica FSC147, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010184:3675424*3675424369841022987Bacillus weihenstephanensis KBAB4, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007622:1214629*1214629123355918931Staphylococcus aureus RF122, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009009:1876367*1876367189610219736Streptococcus sanguinis SK36, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012121:897866*89786692042622561Staphylococcus carnosus subsp. carnosus TM300, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014328:1405484*1405484142841522932Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005139:2731623*2731623275419322571Vibrio vulnificus YJ016 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg