Query: NC_011094:380428 Salmonella enterica subsp. enterica serovar Schwarzengrund str
Start: 380428, End: 403099, Length: 22672
Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011083:403022 | 403022 | 450268 | 47247 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 0 | 21330 | BLASTN svg | BLASTP svg |
NC_011149:361765 | 361765 | 384599 | 22835 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 0 | 21120 | BLASTN svg | BLASTP svg |
NC_006511:2467763 | 2467763 | 2491580 | 23818 | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC | 0 | 21110 | BLASTN svg | BLASTP svg |
NC_010102:2721374 | 2721374 | 2744668 | 23295 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 0 | 21070 | BLASTN svg | BLASTP svg |
NC_011080:383441 | 383441 | 406099 | 22659 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 0 | 20940 | BLASTN svg | BLASTP svg |
NC_004631:2584244* | 2584244 | 2605599 | 21356 | Salmonella enterica subsp. enterica serovar Typhi Ty2, complete | 0 | 20880 | BLASTN svg | BLASTP svg |
NC_003198:378844 | 378844 | 402752 | 23909 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 0 | 20430 | BLASTN svg | BLASTP svg |
NC_006905:401154 | 401154 | 431349 | 30196 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 0 | 15010 | BLASTN svg | BLASTP svg |
NC_003197:367430 | 367430 | 386609 | 19180 | Salmonella typhimurium LT2, complete genome | 0 | 14660 | BLASTN svg | BLASTP svg |
NC_015968:3301958 | 3301958 | 3334366 | 32409 | Enterobacter asburiae LF7a chromosome, complete genome | 0 | 7983 | BLASTN svg | BLASTP svg |
NC_011740:810411 | 810411 | 829573 | 19163 | Escherichia fergusonii ATCC 35469, complete genome | 0 | 6401 | BLASTN svg | BLASTP svg |
NC_013956:4326388 | 4326388 | 4351187 | 24800 | Pantoea ananatis LMG 20103 chromosome, complete genome | 0 | 1877 | BLASTN svg | BLASTP svg |
NC_006905:1961774* | 1961774 | 1984099 | 22326 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 0 | 684 | BLASTN svg | BLASTP svg |
NC_002695:301939 | 301939 | 328730 | 26792 | Escherichia coli O157:H7 str. Sakai, complete genome | 0 | 660 | BLASTN svg | BLASTP svg |
NC_002655:301940 | 301940 | 327599 | 25660 | Escherichia coli O157:H7 EDL933, complete genome | 0 | 660 | BLASTN svg | BLASTP svg |
NC_011080:4703266 | 4703266 | 4728765 | 25500 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 1e-63 | 252 | BLASTN svg | BLASTP svg |
NC_009778:2951207 | 2951207 | 2979088 | 27882 | Enterobacter sakazakii ATCC BAA-894, complete genome | 4e-33 | 151 | BLASTN svg | BLASTP svg |
NC_009648:293052* | 293052 | 326747 | 33696 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 9e-28 | 133 | BLASTN svg | BLASTP svg |
NC_014121:1101093* | 1101093 | 1134357 | 33265 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_011083:2542876 | 2542876 | 2568855 | 25980 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
CP002797:2472908 | 2472908 | 2493599 | 20692 | Escherichia coli NA114, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015224:3291736 | 3291736 | 3313599 | 21864 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_013716:3109700 | 3109700 | 3149905 | 40206 | Citrobacter rodentium ICC168, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014562:1402863 | 1402863 | 1421996 | 19134 | Pantoea vagans C9-1 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |