Query: NC_009749:510266 Francisella tularensis subsp. holarctica FTA, complete genome
Start: 510266, End: 528599, Length: 18334
Host Lineage: Francisella tularensis; Francisella; Francisellaceae; Thiotrichales; Proteobacteria; Bacteria
General Information: Isolated from an immunocompetent 56-year old male with bacteremic pneumonia in France. Francisella tularensis is a non-motile, aerobic, rod-shaped Gram-negative bacterium and is the causative agent of tularemia. This organism was first identified by Edward Francis as the causative agent of a plague-like illness that affected squirrels in Tulare county in California in the early part of the 20th century. The organism now bears his name. The disease, which has been noted throughout recorded history, can be transmitted to humans by infected ticks or deerflies, infected meat, or by aerosol, and thus is a potential bioterrorism agent. This organism has a high infectivity rate, and can invade phagocytic and nonphagocytic cells, multiplying rapidly. Once within a macrophage, the organism can escape the phagosome and live in the cytosol. It is an aquatic organism, and can be found living inside protozoans, similar to what is observed with Legionella.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008369:514995 | 514995 | 534666 | 19672 | Francisella tularensis subsp. holarctica OSU18, complete genome | 0 | 15210 | BLASTN svg | BLASTP svg |
NC_007880:508407 | 508407 | 530944 | 22538 | Francisella tularensis subsp. holarctica, complete genome | 0 | 15210 | BLASTN svg | BLASTP svg |
NC_008245:1625715 | 1625715 | 1646324 | 20610 | Francisella tularensis subsp. tularensis FSC 198, complete genome | 0 | 15010 | BLASTN svg | BLASTP svg |
NC_006570:1625909 | 1625909 | 1648178 | 22270 | Francisella tularensis subsp. tularensis Schu 4, complete genome | 0 | 15010 | BLASTN svg | BLASTP svg |
NC_010677:353839 | 353839 | 376210 | 22372 | Francisella tularensis subsp. mediasiatica FSC147, complete genome | 0 | 14960 | BLASTN svg | BLASTP svg |
NC_008601:1560482* | 1560482 | 1603009 | 42528 | Francisella tularensis subsp. novicida U112, complete genome | 0 | 14140 | BLASTN svg | BLASTP svg |
NC_010336:1282265 | 1282265 | 1308235 | 25971 | Francisella philomiragia subsp. philomiragia ATCC 25017, complete | 0 | 2040 | BLASTN svg | BLASTP svg |
NC_015696:798000 | 798000 | 823195 | 25196 | Francisella sp. TX077308 chromosome, complete genome | 0 | 1949 | BLASTN svg | BLASTP svg |
NC_009654:3215205* | 3215205 | 3245679 | 30475 | Marinomonas sp. MWYL1, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_015460:2602416 | 2602416 | 2623189 | 20774 | Gallibacterium anatis UMN179 chromosome, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_014378:525717* | 525717 | 551551 | 25835 | Acetohalobium arabaticum DSM 5501 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014378:4428* | 4428 | 24226 | 19799 | Acetohalobium arabaticum DSM 5501 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014654:1* | 1 | 29105 | 29105 | Halanaerobium sp. 'sapolanicus' chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_015275:1* | 1 | 23110 | 23110 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_007292:586917 | 586917 | 610099 | 23183 | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome | 1e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015222:1047944* | 1047944 | 1076099 | 28156 | Nitrosomonas sp. AL212 chromosome, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008262:1 | 1 | 12599 | 12599 | Clostridium perfringens SM101, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_003366:1 | 1 | 20670 | 20670 | Clostridium perfringens str. 13, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015565:2879603* | 2879603 | 2905999 | 26397 | Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014393:1* | 1 | 19251 | 19251 | Clostridium cellulovorans 743B chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013316:1* | 1 | 48955 | 48955 | Clostridium difficile R20291, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009089:1* | 1 | 34599 | 34599 | Clostridium difficile 630, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009053:313779 | 313779 | 336878 | 23100 | Actinobacillus pleuropneumoniae L20, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_020304:1222000* | 1222000 | 1250330 | 28331 | Desulfocapsa sulfexigens DSM 10523, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012778:2997* | 2997 | 25895 | 22899 | Eubacterium eligens ATCC 27750, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008261:1* | 1 | 20667 | 20667 | Clostridium perfringens ATCC 13124, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009922:1* | 1 | 22763 | 22763 | Alkaliphilus oremlandii OhILAs, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010723:1* | 1 | 17599 | 17599 | Clostridium botulinum E3 str. Alaska E43, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014410:8694* | 8694 | 28775 | 20082 | Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome, | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010674:1* | 1 | 20762 | 20762 | Clostridium botulinum B str. Eklund 17B, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_003454:618290* | 618290 | 638315 | 20026 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_019970:8938* | 8938 | 29669 | 20732 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010161:1501758* | 1501758 | 1532378 | 30621 | Bartonella tribocorum CIP 105476, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007929:1805000* | 1805000 | 1833999 | 29000 | Lactobacillus salivarius subsp. salivarius UCC118, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_006142:243899* | 243899 | 262337 | 18439 | Rickettsia typhi str. Wilmington, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013170:1* | 1 | 14599 | 14599 | Cryptobacterium curtum DSM 15641, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010939:405477* | 405477 | 447424 | 41948 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 9e-06 | 60 | BLASTN svg | BLASTP svg |