Pre_GI: BLASTN Hits

Some Help

Query: NC_009656:4079319 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 4079319, End: 4103662, Length: 24344

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:34528853452885349484041956Pseudomonas fluorescens Pf-5, complete genome0741BLASTN svgBLASTP svg
NC_012660:24318032431803244959917797Pseudomonas fluorescens SBW25 chromosome, complete genome2e-44188BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome2e-25125BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome3e-21111BLASTN svgBLASTP svg
NC_020126:5152359*5152359517395921601Myxococcus stipitatus DSM 14675, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004578:39211993921199394421523017Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009439:10117410117412533624163Pseudomonas mendocina ymp, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002944:29297429297431420821235Mycobacterium avium subsp. paratuberculosis K-10, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008595:31286131286133836925509Mycobacterium avium 104, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014623:18832591883259190483621578Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015957:49635004963500498135217853Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_007492:23107932310793233159920807Pseudomonas fluorescens PfO-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007333:14110501411050143510924060Thermobifida fusca YX, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019964:18731671873167190103827872Halovivax ruber XH-70, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg